Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev05g1000 ATGGATGAAGTTGCACGCTTTATGGACTGGGATTTGCAAGCCATTGTGAAAGGAATAAGCACCAGTGAAGAAGCCCCTGTTGCTGCAGCCGCCACCATCATAGACAATAATTCTCCTCATCATCATCAACAGGACCTGTTTTTCAATTTCCACGAATTCTCAGAAACCACATGGGTCATTGACGAATTGGAAGAGCTTTACAAACCTTTGTACCCTGTTCCGGAGAACAACAGTAGTATTTCCACCGTCACAAGCTCGCTACTAGCTATCCCCGAAGAACAAGTCAAAGTACTCAAACCACCTGCAGCATCCAAATCTAAAAGAAGGAAGAAGAATGGGAAGAGGAGAGTGAAGGAGGTGACAGAAGCAGAGGCATATAGCGACGGATGGGCGTGGCGTAAATATGGGCAGAAACCAATAAAGGGGTCGCCGTATCCGAGGAGCTATTACAGGGGCGAAGACGCAGATAGTGGAAATTGGTTACAGAACATTGAGTTAGAGGAGGAACTGAACGGGCTCGACCTTGATGACCAACTACTTGATTTTGATGGCTGCGGTTTCATGGATACTACTTTTGATGATGACACTTGGTTCAATTCCTCCATAGACCTAACGTAG 618 0.4595 MDEVARFMDWDLQAIVKGISTSEEAPVAAAATIIDNNSPHHHQQDLFFNFHEFSETTWVIDELEELYKPLYPVPENNSSISTVTSSLLAIPEEQVKVLKPPAASKSKRRKKNGKRRVKEVTEAEAYSDGWAWRKYGQKPIKGSPYPRSYYRGEDADSGNWLQNIELEEELNGLDLDDQLLDFDGCGFMDTTFDDDTWFNSSIDLT* 206
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev05g1000 205 SMART WRKY_cls 126 174 IPR003657 GO:0003700|GO:0006355|GO:0043565
Aev05g1000 205 PANTHER WRKY TRANSCRIPTION FACTOR 30-RELATED-RELATED 9 151 IPR044810 GO:0003700
Aev05g1000 205 Pfam WRKY DNA -binding domain 128 153 IPR003657 GO:0003700|GO:0006355|GO:0043565
Aev05g1000 205 SUPERFAMILY WRKY DNA-binding domain 120 151 IPR036576 GO:0003700|GO:0006355|GO:0043565
Aev05g1000 205 Gene3D WRKY domain 110 161 IPR036576 GO:0003700|GO:0006355|GO:0043565
Aev05g1000 205 ProSiteProfiles WRKY domain profile. 121 158 IPR003657 GO:0003700|GO:0006355|GO:0043565
Aev05g1000 205 PANTHER WRKY TRANSCRIPTION FACTOR 63-RELATED 9 151 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev05g1000 Aev-Chr5 7026281 7027269 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev05g1000 1 151 WRKY Transcription Factor Family AT4G23550 38.636 4.78e-23 92.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Aev05g1000 WRKY 5.7e-11 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev05g1000 K13426 - gmx:102669888 130.954