Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev05g0988 ATGATGATGGGTCGAGCAGTGTGTGAAGAGAAATCAAGGGAGATGGTTTCATCATCAACTGGAGGGTTCTGCTATTCGGATGTGTCATCATCATCTGGTGGTAATATGCAAACCACCCATCTACTGGTGAACCAGATCCAAGCTGCTGCTGCTGGGTTTGTATCTGACCCTGAGATGTTCAACCTCACCACAGGGATGGAGATGATAGGGTTTTCCAAGAACCACCTTCAACAGAGCACTGATACCACCAACGCTCTCATGTGGAAAAGCTTCTTCAAACACGGTCAGCACCCTGCAGACGACGCAGCAGCAGGTCCTTCCTCTTCCAAGACCACACCCTTGTACCAACAACACCAACCCGATTTCACATCCGGGATTTCTGAAACAACAAGCGCCGATCATCATCATCAGAATCTAATCCTCGGGGCTCATCATCATCATCATGATTCCACACAAGTAGTACAGCCGTGGCAAGATCAGAACACCAACAACAATAGCAGCAGGGCTAATTTGTTAGTGGATGATTCATCTTTGAGGTGTGTGTTCCCTTGTGAGGGAAACGAGAGGCCAAGTCAAGGCCTTTCACTCTCTCTCAGTTCATCAAATCCTTCAACCATAGGCTTGCAATCCTTTGAGCTCAGGCAAACCAGCAGCCCCCACCACTTGTATGCAAAATCAGGAGGGAATAATAATAATAATAATGGTCCTCCTCAATCTCATCATCAACAACTCATGTTGCAAGCTCCTTCTTCTAATCCGAGTCTGTATCAGGGACACTTTGTGCTCAAGAACTCAAAGTACTTGTTGCCAGCACAGGAACTCCTCAACGAGTTTTGTAGCCTAGGCATCAGGCAAACCGATGCGGCAAAGCAAAAGTCCAACAAGAAACAGTGGGAAGTAGAAGAGGATAACGGTGGTGGTGGTGGTGGAAGCGCTTCCTCCTCAAAGAAGCATACTCTTACCTCTCTTGAATTCATGGAATTGCAGAAGAGAAAGACTAAGCTGCTTTCAATGCTCGAAGAGCTTGACAGAAGATACAAGCACTACAGAAATCAGATGAAGGCGGTGGTGTCGTCGTTCGAGGCGGTGGCAGGCAGCGGCGCGGCGACGGTGTACTCAGCCTTGGCTCTGAAGGCGATGTCAAAGTACTTCAGGAATCTGAAGGATGCGATAATGGGGCAGATTCAGGCGACAAGGAAGGCCATGGGGGAGAAGGATCCGGTTGCACCTGGGACGACAAGGGGTGAGACGCCAAGGCTGAAGGTGATTGACCAAGCCATGAGGCAGCAAAGGGCGTTTCAGCAAATGACCATGATGGAGACACATCCTTGGAGACCACAACGTGGCCTCCCCGAGAGATCTGTCTCGGTTCTTCGTGCTTGGCTTTTTGAGCATTTTCTCCATCCGGTGAGGCTATGGAAGCCAATGGTGGAGGAAATGTACACGGAGGAGCTAAGGGAGCAAGAAAACAACATGGGCTCCTCAGAGGGTGGGGGGACCGATCCCGATCTAGACGATCATCATCATAACCGGCAGCAGCAAGGTCCTTCAACAAGATCGGAGGACCAAAAGCCAACACCGGATAGACTGGTAATGGAGTCAGAGTGCGCAACATCCTCATCCATACTCAACCTGCACCATGAAAACAAAAACGACCAGTGCGCAACATTTGGGTCCGTTGAGCTTGATTTTTCATCATACAGCACGCAGCACCAACAAGGTTTCAATAGTGGTGGCGGTGGAGTGTCTCTGACGCTAGGGTTACAGCAACACGGTCATGGTCATGGTGTGAGCATTGCGTTCCCTGGTGCAGGGTCTCAGAGCTCCATGTTCTACGGAAGGGAGCAGCAGCTTGAAGACTGTACTCATCATCAGTACTCTTCGCTTCTTGATGGAGAATCACAGAATCATCTTCCTTATCGGAATCTCATGGGTGCACAGCTCCTTCATGATCTCGCAGGATAG 1965 0.4962 MMMGRAVCEEKSREMVSSSTGGFCYSDVSSSSGGNMQTTHLLVNQIQAAAAGFVSDPEMFNLTTGMEMIGFSKNHLQQSTDTTNALMWKSFFKHGQHPADDAAAGPSSSKTTPLYQQHQPDFTSGISETTSADHHHQNLILGAHHHHHDSTQVVQPWQDQNTNNNSSRANLLVDDSSLRCVFPCEGNERPSQGLSLSLSSSNPSTIGLQSFELRQTSSPHHLYAKSGGNNNNNNGPPQSHHQQLMLQAPSSNPSLYQGHFVLKNSKYLLPAQELLNEFCSLGIRQTDAAKQKSNKKQWEVEEDNGGGGGGSASSSKKHTLTSLEFMELQKRKTKLLSMLEELDRRYKHYRNQMKAVVSSFEAVAGSGAATVYSALALKAMSKYFRNLKDAIMGQIQATRKAMGEKDPVAPGTTRGETPRLKVIDQAMRQQRAFQQMTMMETHPWRPQRGLPERSVSVLRAWLFEHFLHPVRLWKPMVEEMYTEELREQENNMGSSEGGGTDPDLDDHHHNRQQQGPSTRSEDQKPTPDRLVMESECATSSSILNLHHENKNDQCATFGSVELDFSSYSTQHQQGFNSGGGGVSLTLGLQQHGHGHGVSIAFPGAGSQSSMFYGREQQLEDCTHHQYSSLLDGESQNHLPYRNLMGAQLLHDLAG* 655
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev05g0988 654 Coils Coil 325 359 - -
Aev05g0988 654 PANTHER HOMEOBOX PROTEIN BEL1 HOMOLOG 470 602 - -
Aev05g0988 654 MobiDBLite consensus disorder prediction 97 131 - -
Aev05g0988 654 MobiDBLite consensus disorder prediction 500 515 - -
Aev05g0988 654 PANTHER HOMEOBOX PROTEIN TRANSCRIPTION FACTORS 10 469 - -
Aev05g0988 654 MobiDBLite consensus disorder prediction 486 534 - -
Aev05g0988 654 MobiDBLite consensus disorder prediction 220 245 - -
Aev05g0988 654 MobiDBLite consensus disorder prediction 153 168 - -
Aev05g0988 654 PANTHER HOMEOBOX PROTEIN BEL1 HOMOLOG 10 469 - -
Aev05g0988 654 MobiDBLite consensus disorder prediction 145 168 - -
Aev05g0988 654 PANTHER HOMEOBOX PROTEIN TRANSCRIPTION FACTORS 470 602 - -
Aev05g0988 654 MobiDBLite consensus disorder prediction 290 317 - -
Aev05g0988 654 Pfam Associated with HOX 261 392 IPR006563 -
Aev05g0988 654 MobiDBLite consensus disorder prediction 105 131 - -
Aev05g0988 654 SMART prehox3 256 393 IPR006563 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev05g0988 Aev-Chr5 6956613 6960229 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev05g0988 170 653 Homeobox Transcription Factor Family AT5G41410 41.831 2.13e-108 338
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev05g0988 - - lang:109331282 653.669
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev05g0988 05 6956613 6960229 Aev03g3090 03 29636711 29640299 PCT
Aev01g1994 01 24703501 24705560 Aev05g0988 05 6956613 6960229 PCT