Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev05g0985 ATGGGATTTCCGGTGGGTTACACAGAGCTTTTGTTACCTAAGCTCTTTCTTCACTTACTCTATTTCCTGGGTTTCATTCGAAGGTTCATCTGCTCCATCTTCCGCTACTTGGGTCTCCAGGATTTCCTGGAACCCGACATTGGGTGGTCAGACCGGTCAGCAGCGCCAGAATTCCAATCAGTGTCGGCGCTGCTGATCCGGGAAATCCTCCCTGTGGTGAGGTTCTCGGAGTTGGTGGATCCGCCGGAGAGCTGCGCCGTCTGCCTCCATGAGTTTGAGGCAGAGGACGAGATCCGGCGGCTCACCAACTGCCGGCACATATTCCACAGGGAATGCCTGGACCGTTGGATGGGGTATGACCAGAGAACTTGCCCCTTGTGCCGGACGCCCTTTATACCGGACGATATGCAAGGTGCTTTCAATGAGAGGCTTTGGGCTGCTTCTGGGATCCCTGAATTCTACGATGAGTTTCCTCATCATATCGCAACACCCTCGTAG 498 0.5422 MGFPVGYTELLLPKLFLHLLYFLGFIRRFICSIFRYLGLQDFLEPDIGWSDRSAAPEFQSVSALLIREILPVVRFSELVDPPESCAVCLHEFEAEDEIRRLTNCRHIFHRECLDRWMGYDQRTCPLCRTPFIPDDMQGAFNERLWAASGIPEFYDEFPHHIATPS* 166
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev05g0985 165 ProSiteProfiles Zinc finger RING-type profile. 85 128 IPR001841 -
Aev05g0985 165 PANTHER BRH1 RING FINGER PROTEIN 1 156 - -
Aev05g0985 165 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 68 135 IPR013083 -
Aev05g0985 165 SUPERFAMILY RING/U-box 65 134 - -
Aev05g0985 165 Pfam Ring finger domain 84 128 IPR001841 -
Aev05g0985 165 PANTHER RING ZINC FINGER PROTEIN-RELATED 1 156 - -
Aev05g0985 165 SMART ring_2 85 127 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev05g0985 Aev-Chr5 6926681 6927178 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev05g0985 1 149 C3H Transcription Factor Family AT1G63840 60.390 2.47e-61 185
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev05g0985 K16281 - zju:107429858 266.159
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev05g0985 05 6926681 6927178 Aev03g3088 03 29613686 29614174 PCT