Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev05g0983 ATGTACAAATATTCAAGCTCAGACATGTTCTCCTCCTCCTCCTACCACGATGAGAACCAATTAGACCTTCTAGTTTTCTCTAACCCTTTTATTCCTTTCTTCACTACTACATGCTCTGATCCCATTGATGATATAGCTCAATCAGAGATCACCAATTCGAATCATCATCATCATCATCATTCTTCTTCTCCTCTGGACCACCCCTTTTCCCACTTGGAAAGCCAGAGCAGCCTCCTCTATCAGGGTAACCAAGATGAAGAACAGCCTCAACCAACATATCTCTCTGCTTTGGAAGGGTCTGAACTGAAAATAAGTAGCAGTGAGGAATGCCAAATGGGTGGTCTTGTTGACATTAATACCTATAATAATCATGTCGATCCTCACATGCAGAGGAGCTCCAGTTGCAACTCTTTCGATGCCAACTCTTATGAAGCAGCACCTCAACACTGTGACATTCTCATGGACTCACCAAATTTTCATCAGTGGCGTGCCACCACCTTGACCTCCCTCCAAAATAGTTTCTTCGCTGGACAAGGACAATTAAGGAGGGTCTTCAGTGCAGGAGATTTGCAGAGCAGGTTTGAAACGGAGAGCAGGAGGTTGTTGGAGGAAGCAAACTTGAATAATAATAAAGTAGGGCGTTACAGTCCGGAAGAACGAAAGGAAAAAATCTCAAAGTACAGGGCCAAGAGAAGCCAGAGGAAGTTCAACAAAACTATCAAGTATGCATGCCGAAAGACACTAGCGGACAATAGAGCGCGCATACGTGGCAGATTCGCACGCAATGACCTGATTCTTCCTCAATGTTCAACCGGAGATGATGAATTCTGGATTGACCTAATTGAAAGGTTATTAAACGATGAGGTCCTAAGCTAG 876 0.4395 MYKYSSSDMFSSSSYHDENQLDLLVFSNPFIPFFTTTCSDPIDDIAQSEITNSNHHHHHHSSSPLDHPFSHLESQSSLLYQGNQDEEQPQPTYLSALEGSELKISSSEECQMGGLVDINTYNNHVDPHMQRSSSCNSFDANSYEAAPQHCDILMDSPNFHQWRATTLTSLQNSFFAGQGQLRRVFSAGDLQSRFETESRRLLEEANLNNNKVGRYSPEERKEKISKYRAKRSQRKFNKTIKYACRKTLADNRARIRGRFARNDLILPQCSTGDDEFWIDLIERLLNDEVLS* 292
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev05g0983 291 PANTHER CCT MOTIF FAMILY PROTEIN 21 283 - -
Aev05g0983 291 Pfam CCT motif 220 262 IPR010402 GO:0005515
Aev05g0983 291 ProSiteProfiles CCT domain profile. 220 262 IPR010402 GO:0005515
Aev05g0983 291 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 4 21 283 IPR045281 GO:0009909
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev05g0983 Aev-Chr5 6917221 6918420 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev05g0983 212 261 C2C2-CO-like Transcription Factor Family AT3G02380 50.000 2.81e-10 58.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Aev05g0983 CCT 2.6e-16 CL0281
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev05g0983 - - gmx:100786853 169.859
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev05g0983 05 6917221 6918420 Aev03g3086 03 29597455 29598995 PCT