Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev05g0982 ATGTTCTCTCTGCAGTACCCAAGAGTAGCAGAAGAGCATGTTCCATTATCATCTAACCTTGGTGCTGCTTCTGCTTTTTCTGGGGGACTCTTAGTTGATACTAATCTAGACACTTCAATTCCTGATACATATAGACCGCCTCCTGCTCCTATTCCTTTTAATGTTACATTAGGTGTTACTCCAACTACACCTGTGGCCCGAGAAATTTGTTGTGACAAGACTAATGCATCTGTACATACTACAAATACTAATTCAATTGAAGAAACCATTACTGGTGGAAATCATGGGATCTCAGCTAAGTTGGAAGAGCTGAAGGAATCAGAGCTCAAAGTTCAGAGTGCTTTAGAACTTAACTCAGCAAAGGATTCTGAAATAGAACTTCCAAAGCTGGTGGAATCTATCATTTTAGTGGAAGAGGAGGATACATGCCCAATTTGTTTAGAAGAGTACGATGCAGAGAATCCAAAGCTCACCACAAAATGTGACCATTATTTCCACCTTGCATGCATTCTGGAATGGATGGAAAGAAGTGAAACTTGTCCTGTCTGTGATCAGGATATGGTTTTGTACCCGCTGATTAAGTAA 585 0.4034 MFSLQYPRVAEEHVPLSSNLGAASAFSGGLLVDTNLDTSIPDTYRPPPAPIPFNVTLGVTPTTPVAREICCDKTNASVHTTNTNSIEETITGGNHGISAKLEELKESELKVQSALELNSAKDSEIELPKLVESIILVEEEDTCPICLEEYDAENPKLTTKCDHYFHLACILEWMERSETCPVCDQDMVLYPLIK* 195
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev05g0982 194 PANTHER ANAPHASE-PROMOTING COMPLEX SUBUNIT 11 RING-H2 FINGER PROTEIN 4 193 - -
Aev05g0982 194 Pfam Ring finger domain 141 183 IPR001841 -
Aev05g0982 194 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 117 189 IPR013083 -
Aev05g0982 194 ProSiteProfiles Zinc finger RING-type profile. 143 184 IPR001841 -
Aev05g0982 194 PANTHER ZINC FINGER, RING/FYVE/PHD-TYPE 4 193 - -
Aev05g0982 194 SUPERFAMILY RING/U-box 135 189 - -
Aev05g0982 194 SMART ring_2 143 183 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev05g0982 Aev-Chr5 6908399 6909213 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev05g0982 6 189 C3H Transcription Factor Family AT5G41350 51.596 2.08e-58 181
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev05g0982 - - gmx:100816369 285.804