Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev05g0954 ATGGCCACCACAAGGTCCTCCGAGGACATCGTCGATACGACGCCGTTCCTAAGCAATCCCCCCGGCGGCGGTGGAACCTCCGCCGAGGAATTTCATTCCGGCCGTCGATTCGTTCGGCGGCAGAGCCTCCGCCAGGCGGCGCGGTTTCTCCGGCAGGCAAGCGGGCGGAGGATGATGCGTGAGCCGTCGATGCTTGTCCGCGAGACCGCGGCGGAGCAATTGGAGGAGAGGCAGAGCGATTGGGCGTATTCGAAGCCGGTAGTGATCCTCGACATCATCTGGAACTTGGCGTTCGTGGTGGTTGCGACGACGGTTCTAGTCCTGAGCAGGAACGAGGCGCCAGGGATGCCTCTGAGATTGTGGATTGTAGGGTACGCTATGCAGTGCGTGCTTCACATGGTGTGTGTCTGCTTTGAGTATAGGAGAAGGAGGAGGAACCAGCGCGCACAATCCTTGAATCCTGGGGGAGAAAGGATCGGAAGCAGTGGGAATTTGAGTTCAGCTTCGAGGGAGGGTTCTGCGCAATACGTTACACTGGAGCAGTTGGATGAGGAAAATACTAGTGTTGCAAAGCATTTGGAGTCAGCCAATACAATGTTTTCTTTTATTTGGTGGATTATTGGATTCTACTGGGTATCAGCTGGTGGTCAAGATTTAGCTCAAGATTCCCCTCAGCTTTACTGGCTATGTATAATTTTCCTTGGTTTCGATGTTTTCTTTGTCGTTTTCTGTGTCGCACTTGCGTGTATCATTGGCATCGCTGTTTGCTGTTGTCTTCCATGTATCATAGCACTTCTTTATGCAGTTGCAGACCAGGAAGGAGCATCAAAAGAAGACATTGAGCAGTTGTCTAAGTTTAAATTTAGAAGAATTGAAACTAATGAGAAACATGCTGGAGATACACAAGGACCTGTTGGAGGAATAATGACCGAATGCCAATCTGATTCACCTAGTGAGCGTGTTCTTGCTGAGGAGGACGCGGAATGTTGCATATGCCTTTCTTCTTATGACGATGGGGTTGAACTAAGGCAACTTCCTTGCGGTCACCATTTTCACTGTGCATGTGTCGATAAATGGCTATATATTAATGCCACCTGCCCCCTCTGCAAGTATAACATCTTGAAAAGTAGCAACCTCAATCAAGAGGAAGTGTAG 1155 0.4987 MATTRSSEDIVDTTPFLSNPPGGGGTSAEEFHSGRRFVRRQSLRQAARFLRQASGRRMMREPSMLVRETAAEQLEERQSDWAYSKPVVILDIIWNLAFVVVATTVLVLSRNEAPGMPLRLWIVGYAMQCVLHMVCVCFEYRRRRRNQRAQSLNPGGERIGSSGNLSSASREGSAQYVTLEQLDEENTSVAKHLESANTMFSFIWWIIGFYWVSAGGQDLAQDSPQLYWLCIIFLGFDVFFVVFCVALACIIGIAVCCCLPCIIALLYAVADQEGASKEDIEQLSKFKFRRIETNEKHAGDTQGPVGGIMTECQSDSPSERVLAEEDAECCICLSSYDDGVELRQLPCGHHFHCACVDKWLYINATCPLCKYNILKSSNLNQEEV* 385
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev05g0954 384 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 308 378 IPR013083 -
Aev05g0954 384 MobiDBLite consensus disorder prediction 1 30 - -
Aev05g0954 384 PANTHER TRANSCRIPTION FACTOR C2H2 FAMILY-RELATED 3 384 - -
Aev05g0954 384 SUPERFAMILY RING/U-box 320 376 - -
Aev05g0954 384 SMART ring_2 329 369 IPR001841 -
Aev05g0954 384 PANTHER TARGET OF ERK KINASE MPK-1 3 384 - -
Aev05g0954 384 CDD RING-H2_RNF111_like 328 372 - -
Aev05g0954 384 Pfam Ring finger domain 328 370 IPR001841 -
Aev05g0954 384 ProSiteProfiles Zinc finger RING-type profile. 329 370 IPR001841 -
Aev05g0954 384 MobiDBLite consensus disorder prediction 149 170 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev05g0954 Aev-Chr5 6737057 6740165 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev05g0954 17 377 C3H Transcription Factor Family AT1G68070 49.180 1.51e-122 356
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev05g0954 - - gmx:100790497 615.15
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev01g1887 01 23854400 23858963 Aev05g0954 05 6737057 6740165 PCT