LGRPv2

Gene search

Sequence information

Show entries

Search:

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Aev05g0952	ATGCGCATCGCAAATCTCAGAGAGGTTCTTCCGGCGAGTTCGATGGGCGGCGAGGAGAGAGAGAGCGCGTACAAGCTTCTGGTGGATCGGTGTCGGAGCCTGGAGGAAGGTCAAGCCAAGCTGATTGAACAGTTCAATGAGCTCTTGCAGGAGAAGAACAATAAACTCAGGGAAGACGATGAGGTAGTGGTCGCAGATTCAACGGTGCGTTATCTCTCGGGCCACTTCTTCTCCGGGAGTCCCTACGCTAGCGTCTTGAAATGCATGGGCCACGCCGTTCATGTTTACAGAGCTTCCTCCGGAGAGATCATATACTGGAATCGTTCTGCAGAAATACTTTATGGATGGAAGGACTATGAAATCATTGGACAGAGAGTAGCTAAGTTCCTAGTCACTGAAGAGTATTATGCAGCTCTGCAAAAAATTCTTGAAAGATTGATCACTGGAGTGCCATGGTCTGGGAAGCTTCCTTTCAAGAAGAGATCTGGTGAAGTATTTATGGCAATGGTGACAAAATCTCCTCTCTATGAGGGTGACGAGCCTGTTGGTGTTATCACTGTTTCAAGTGATGCTGCTGTGTTTAAGTCAATGGATTCAGAAAATCGAAGAAATCACCAACCTGGAGCACAGAGGTCAAATTTCAAAAGGATTCAGTGGCCTCCACGACCGTTGATTGCATCATCTGTTTCTAATCTGGCATCAAAGTTTCTACGCCGGCATACAGATGAGACATTTTCCAGGAATGCTACAACTGAGGAAGATGAAGAAAAACTAGATAAGCTTGGAATTCATGAAACAAAACCTCATTCTAGACATCACCATGTTGAACACGTAACTGTTAGGGAGGCCTCCCAGAAGGATAAGCCTACAGCTGCAAGAGTTCTCGCTAAGCTTCAACCTGGCAGAAGTGGAAAATGTGGGAAGGATGATGAAAGTATTAAAACTAATTGCACAACTGATAGTTCAGGAAGCAATAGAGTGGATATCCATGATGATTCATCTAGAGGTTCAGGAGCATTCACTTGGCACAAGGATGTTTCTAATAGAGAGGATAGAGAAGATCCATTAAGATTACACTGCCACTTTGATCCAAAGAAATTGGAACCAGAAGCTAAAAATATGGTGATAGAAGATGAAGTACAAAAGCAGCAAGAAGGAGTTCAATTGCCAAGTTCAAGGGAGAGCGTAGGTAGTCATGAAAGTTCATCAAGCAAAGGAGATAATGAGTCAAACTCTGTTGTTGAGTGTGAAATCCATTGGGAAGACCTTCAATTAAGAGAGGAGATTGGTCAAGGTTCTTATGCTGTTGTTTATCATGGAATTTGGAATGGATCGGATGTTGCCGTCAAGGTTTACTTCGGGAACGGATACTCCGATGAAACATTACAAGACTACAGAAAAGAGATTGATATAATGAAGAGACTGAGACACCCTAATGTACTGCTTTTCATGGGAGCAGTATATTCACAGAAAAGGCTTGCCATTGTGACCGAGTTATTACCTAGGGGAAGCCTTTTCAAAATTCTTCACAAGAGCAATCAACCCTTAGACATCAGAAGGCTTTTAAGGATGGCCCTTGATGTTGCTAGAGGTATGAATTATCTTCACCGCAGAAATCCGCCAATTGTGCATAGAGACCTGAAGTCTTCAAACCTGCTTGTTGATAAGAATTGGACTGTCAAGGTTGGAGACTTTGGCTTGTCAAGGTTGAAGGATGCAACTTTATTGACTACAAAATCTGGAAGAGGCACTCCTCAATGGATGGCCCCTGAAGTCCTTCGAAATGAGCCTTCAAATGAGAAGTCTGACGTGTATAGTTTTGGTGTCATCCTCTGGGAACTAATGACGCAATCCATTCCGTGGGAAAACTTGAATTCCTTACAGGTGGTTGGCGTCGTAGGATTTATGGATAGAAGGCTTGATCTGCCAGAGGGGCTTGATCCTCATGTAGCATCAATCATCTGTGACTGCTGGCGAAGTGATCCAGAACAACGCCCATCATTTGAAGAGCTGATACAGAGAATGATGTTTCTTATCAACAGAGTAAACGCAATGTCAATTAGGAGAATTTCAGAATCCTAA	2082	0.4347	MRIANLREVLPASSMGGEERESAYKLLVDRCRSLEEGQAKLIEQFNELLQEKNNKLREDDEVVVADSTVRYLSGHFFSGSPYASVLKCMGHAVHVYRASSGEIIYWNRSAEILYGWKDYEIIGQRVAKFLVTEEYYAALQKILERLITGVPWSGKLPFKKRSGEVFMAMVTKSPLYEGDEPVGVITVSSDAAVFKSMDSENRRNHQPGAQRSNFKRIQWPPRPLIASSVSNLASKFLRRHTDETFSRNATTEEDEEKLDKLGIHETKPHSRHHHVEHVTVREASQKDKPTAARVLAKLQPGRSGKCGKDDESIKTNCTTDSSGSNRVDIHDDSSRGSGAFTWHKDVSNREDREDPLRLHCHFDPKKLEPEAKNMVIEDEVQKQQEGVQLPSSRESVGSHESSSSKGDNESNSVVECEIHWEDLQLREEIGQGSYAVVYHGIWNGSDVAVKVYFGNGYSDETLQDYRKEIDIMKRLRHPNVLLFMGAVYSQKRLAIVTELLPRGSLFKILHKSNQPLDIRRLLRMALDVARGMNYLHRRNPPIVHRDLKSSNLLVDKNWTVKVGDFGLSRLKDATLLTTKSGRGTPQWMAPEVLRNEPSNEKSDVYSFGVILWELMTQSIPWENLNSLQVVGVVGFMDRRLDLPEGLDPHVASIICDCWRSDPEQRPSFEELIQRMMFLINRVNAMSIRRISES*	694

Showing 1 to 1 of 1 entries

Previous1Next

Annotation information

Show entries

Search:

Seq ID	Length	Analysis	Description	Start	End	IPR	GO
Aev05g0952	693	MobiDBLite	consensus disorder prediction	384	411	-	-
Aev05g0952	693	PANTHER	SERINE-THREONINE PROTEIN KINASE	383	675	-	-
Aev05g0952	693	PANTHER	SERINE-THREONINE PROTEIN KINASE	27	261	-	-
Aev05g0952	693	Coils	Coil	38	62	-	-
Aev05g0952	693	Pfam	PAS fold	98	186	IPR013767	GO:0006355
Aev05g0952	693	ProSitePatterns	Protein kinases ATP-binding region signature.	429	450	IPR017441	GO:0005524
Aev05g0952	693	TIGRFAM	sensory_box: PAS domain S-box protein	99	187	IPR000014	-
Aev05g0952	693	SUPERFAMILY	Protein kinase-like (PK-like)	411	683	IPR011009	-
Aev05g0952	693	PRINTS	Tyrosine kinase catalytic domain signature	602	624	IPR001245	GO:0004672\|GO:0006468
Aev05g0952	693	PRINTS	Tyrosine kinase catalytic domain signature	536	554	IPR001245	GO:0004672\|GO:0006468

Showing 1 to 10 of 28 entries

Previous1 2 3Next

Duplication type information

Show entries

Search:

Select	Gene	Chromosome	Start	End	Duplicated_type
	Aev05g0952	Aev-Chr5	6721746	6726368	Transposed

Showing 1 to 1 of 1 entries

Previous1Next

Functional genes information

Show entries

Search:

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Aev05g0952	15	681	MAP Kinase Kinase Kinase	AT4G23050	45.879	0.0	592

Showing 1 to 1 of 1 entries

Previous1Next

Transcription factors information

Show entries

Search:

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	TKL_CTR1-DRK-2	Aev05g0952		PK_Tyr_Ser-Thr	3.1e-68	CL0016

Showing 1 to 1 of 1 entries

Previous1Next

Pathway information

Show entries

Search:

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Aev05g0952	-		-	gmx:100813707	983.015

Showing 1 to 1 of 1 entries

Previous1Next