Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev05g0944 ATGGCATCACCATCTTCATCATCATCAAAGAGGCACCCTCTGTATCATGGAATCAGGTGCAGAGGAGGCAAATGGGTGTCCGAAATCCGGGAGCCCCGCAAGGCTTCCCGGATATGGCTGGGGACATTCCCCACGCCAGAGATGGCGGCCGCGGCCTATGACGTGGCCGCGTTGGCCTTGAAGGGCGAAAACGCTGTTCTGAATCTTCCTCACTCACTTGGAAAGTACCAAATGCCAGTCACCAACTCCCCTGCTGATATTCGCAGGGCTGCCACTGCTGCAGCAGCTTCCATGAAGCCTCAAGAACTCATCACACACAATATTGATGATGATGTTGCATTGATCAATGCAGATCAGAACAATGAAGCTAATCATGACACTACTACTATAGCTAATAATAATAATAGTACTAATTATTATTATGACACTTCATCATCATCATGGTATGAGAATGATTTCATGGATGAGGAAGCAATATTCGGTATGCCCAGTTTGCTGGTGGATATGGCTGGTGGAATGCTTCTGTCACCGCCTAGAATGAGTTCACCGCCGTCAGATAACTCGCCTGATAAATCAGGTGGAGAGAGTCTATGGAGTTATTTTTGA 606 0.4736 MASPSSSSSKRHPLYHGIRCRGGKWVSEIREPRKASRIWLGTFPTPEMAAAAYDVAALALKGENAVLNLPHSLGKYQMPVTNSPADIRRAATAAAASMKPQELITHNIDDDVALINADQNNEANHDTTTIANNNNSTNYYYDTSSSSWYENDFMDEEAIFGMPSLLVDMAGGMLLSPPRMSSPPSDNSPDKSGGESLWSYF* 202
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev05g0944 201 CDD AP2 13 72 IPR001471 GO:0003700|GO:0006355
Aev05g0944 201 Gene3D AP2/ERF domain 14 72 IPR036955 GO:0003700|GO:0006355
Aev05g0944 201 SUPERFAMILY DNA-binding domain 14 72 IPR016177 GO:0003677
Aev05g0944 201 SMART rav1_2 14 76 IPR001471 GO:0003700|GO:0006355
Aev05g0944 201 MobiDBLite consensus disorder prediction 176 201 - -
Aev05g0944 201 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF042-RELATED 3 201 - -
Aev05g0944 201 ProSiteProfiles AP2/ERF domain profile. 14 70 IPR001471 GO:0003700|GO:0006355
Aev05g0944 201 Pfam AP2 domain 15 62 IPR001471 GO:0003700|GO:0006355
Aev05g0944 201 PANTHER ETHYLENE RESPONSE FACTOR 3 201 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev05g0944 Aev-Chr5 6653850 6654455 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev05g0944 9 200 AP2-EREBP Transcription Factor Family AT5G52020 47.423 2.23e-45 148
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2 or ERF-ERF Aev05g0944 AP2 1.5e-09 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev05g0944 - - gmx:100811020 235.343
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev05g0944 05 6653850 6654455 Aev05g0944 05 6653850 6654455 ECH
Aev01g1876 01 23733511 23734035 Aev05g0944 05 6653850 6654455 PCT