Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev05g0943 ATGAACATTTTCTCATCATCATCGAAGCGAAGCAGTCCTCGGTCGGACGATGAAGTGATACTAGCTGCATCGACGCCGAAGAAGCGCGCGGGGCGGAGAGTGTTCAAGGAGACAAGGCATCCAGTGTACCGAGGAGTAAGGAGAAGGAACAACAACAAGTGGGTTTGCGAGATGCGAGTCCCAAACAACAATACTAGGATTTGGCTTGGGACTTACACTACTCCTGAAATGGCCGCACGTGCACACGATGTTGCCGCGCTCGCCTTCCGTGGCAAGTCCGCTTGCCTCAATTTTGCTGACTCGGCGTGGCGGTTGCAGGTTCCGGCCTCAACCGACGCGGAAGAGGTAAGGAGGGCAGCAGTGGAGGCTGCCACGTCGTTCGCTACCGACGACACCATTAAGAGCAGTAAGAAGATAATTGATGAGAGTGAGAATAATATTGTTGATGGTGATATTGATTATGAAGGTTGCAGCAGTAATGGAAATAATAGTAGTAAGGGTGTTGAAGAAGGAGGAGGGGTGTATGTTCCGGAAGTGCCAGAATTTGAGAACTTGCATGATTTGCTCTCTAGTATGGCGGATGAGCCTTTGAGGTCTCCTCCTCCTTTTACAAGGGACTATTATTGGAATGACGTGGACATGTTTGATGCTGAGGTGTCACTTTGGAGTTTCTCTGTCTAA 681 0.4963 MNIFSSSSKRSSPRSDDEVILAASTPKKRAGRRVFKETRHPVYRGVRRRNNNKWVCEMRVPNNNTRIWLGTYTTPEMAARAHDVAALAFRGKSACLNFADSAWRLQVPASTDAEEVRRAAVEAATSFATDDTIKSSKKIIDESENNIVDGDIDYEGCSSNGNNSSKGVEEGGGVYVPEVPEFENLHDLLSSMADEPLRSPPPFTRDYYWNDVDMFDAEVSLWSFSV* 227
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev05g0943 226 ProSiteProfiles AP2/ERF domain profile. 42 99 IPR001471 GO:0003700|GO:0006355
Aev05g0943 226 PANTHER DEHYDRATION-RESPONSIVE ELEMENT-BINDING PROTEIN 5 226 - -
Aev05g0943 226 Pfam AP2 domain 41 91 IPR001471 GO:0003700|GO:0006355
Aev05g0943 226 Gene3D AP2/ERF domain 42 100 IPR036955 GO:0003700|GO:0006355
Aev05g0943 226 PANTHER DEHYDRATION-RESPONSIVE ELEMENT-BINDING PROTEIN 1D 5 226 IPR045277 GO:0003700
Aev05g0943 226 SUPERFAMILY DNA-binding domain 42 101 IPR016177 GO:0003677
Aev05g0943 226 CDD AP2 43 101 IPR001471 GO:0003700|GO:0006355
Aev05g0943 226 PRINTS Ethylene responsive element binding protein signature 65 81 IPR001471 GO:0003700|GO:0006355
Aev05g0943 226 PRINTS Ethylene responsive element binding protein signature 43 54 IPR001471 GO:0003700|GO:0006355
Aev05g0943 226 SMART rav1_2 42 105 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev05g0943 Aev-Chr5 6646637 6647317 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev05g0943 4 224 AP2-EREBP Transcription Factor Family AT5G51990 46.725 3.56e-59 184
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Aev05g0943 AP2 9.9e-14 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev05g0943 - - gmx:100789097 244.973
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev05g0943 05 6646637 6647317 Aev05g0943 05 6646637 6647317 ECH
Aev01g1875 01 23721198 23721893 Aev05g0943 05 6646637 6647317 PCT