Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev05g0935 ATGCAAGAACCGGGGTTGGGGATGATGGGAATAGGGGGAGGAGAGATGTCAGGTGGTTCGGGCGGCGGCGACCACCAGCAGCGGCAGCTAAAGGCGGAGATAGCGACGCACCCCCTGTACGAGCAGCTGCTTGCGGCACACGTGGCGTGCCTGCGAGTGGCGACGCCGATCGACCAGCTTCCACTGATCGATGCACAGCTGGCACAGTCGCACCATCTTCTTCGCTCTTATGTATCACAACGCACTCACTCTCTTTCCCCTCATGACCGTCAAGACCTTGACAACTTCCTCGCACAGTATTTGATAGTTCTGTGTAGTTTCAAAGAACAGCTTCAGCAGCATGTCAGAGTCCATGCCGTCGAGGCCGTCGTTGCCTGCCGTGACATTGAAAATACCTTACAAGCTCTCACAGGAGTGAGTTTGGGAGAAGGAAGTGGTGCTACGATGTCAGATGATGAGGATGAAATGCAGATGGACTTCTCATTGGATCAGTCAATGAGCGGTGAAGGGCATGACATGATGGGCTTCGGCCCCTTACTTCCTACTGAATCTGAAAGGTCACTCATGGAAAGAGTCCGTCAAGAACTCAAGATTGAGCTCAAGCAGGGTTTTAAGTCAAGGATAGAAGATGTAAGGGAGGAAATACTGAGGAAACGAAGAGCTGGGAAATTACCAGGTGACACTACTTCTGTGCTCAAGAACTGGTGGCAGCAACATGCAAAGTGGCCCTACCCAACTGAAGATGACAAGGCAAAACTAGTGGAGGAGACAGGATTGCAGCTGAAGCAAATCAACAACTGGTTCATAAACCAAAGGAAGCGCAACTGGCACAGCAACTCTCAATCGGTTACCTCTCTCAAGTCCAAGCGCAAAAGAGGAGTGTAA 885 0.513 MQEPGLGMMGIGGGEMSGGSGGGDHQQRQLKAEIATHPLYEQLLAAHVACLRVATPIDQLPLIDAQLAQSHHLLRSYVSQRTHSLSPHDRQDLDNFLAQYLIVLCSFKEQLQQHVRVHAVEAVVACRDIENTLQALTGVSLGEGSGATMSDDEDEMQMDFSLDQSMSGEGHDMMGFGPLLPTESERSLMERVRQELKIELKQGFKSRIEDVREEILRKRRAGKLPGDTTSVLKNWWQQHAKWPYPTEDDKAKLVEETGLQLKQINNWFINQRKRNWHSNSQSVTSLKSKRKRGV* 295
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev05g0935 294 PANTHER HOMEOBOX PROTEIN KNOTTED-1-LIKE 7 2 292 - -
Aev05g0935 294 SMART KNOX1_2 28 72 IPR005540 GO:0003677|GO:0005634
Aev05g0935 294 Pfam KNOX2 domain 86 137 IPR005541 GO:0003677|GO:0005634
Aev05g0935 294 SMART HOX_1 217 282 IPR001356 GO:0003677
Aev05g0935 294 ProSiteProfiles 'Homeobox' domain profile. 215 278 IPR001356 GO:0003677
Aev05g0935 294 SUPERFAMILY Homeodomain-like 217 282 IPR009057 -
Aev05g0935 294 Pfam Homeobox KN domain 235 274 IPR008422 GO:0003677|GO:0006355
Aev05g0935 294 MobiDBLite consensus disorder prediction 1 26 - -
Aev05g0935 294 ProSiteProfiles ELK domain profile. 195 215 IPR005539 GO:0003677
Aev05g0935 294 CDD homeodomain 218 279 IPR001356 GO:0003677
Aev05g0935 294 Pfam KNOX1 domain 30 71 IPR005540 GO:0003677|GO:0005634
Aev05g0935 294 Gene3D - 214 289 - -
Aev05g0935 294 PANTHER HOMEOBOX PROTEIN TRANSCRIPTION FACTORS 2 292 - -
Aev05g0935 294 SMART KNOX2_2 83 138 IPR005541 GO:0003677|GO:0005634
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev05g0935 Aev-Chr5 6585110 6588538 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev05g0935 1 291 Homeobox Transcription Factor Family AT1G62990 79.730 1.77e-171 474
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-KNOX Aev05g0935 KNOX2 2.5e-16 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev05g0935 - - jre:108990690 496.508
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev05g0935 05 6585110 6588538 Aev05g0935 05 6585110 6588538 ECH
Aev05g0935 05 6585110 6588538 Aev03g0589 03 4339767 4347890 PCT