Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev05g0930 ATGGCTTCCACAATAGTTCAACCTCGTAGCTTCTTGCTATTTGCATTTACATTGATGTTCACAATCATGACAGAGCCAACACCAACACTAGCTTCCCAAATTATATTTCGACCCAGTCAATGGTCTCTTGCACATGCCACCTTTTACGGTGACGAAACTGCCTCTGCTACCATGGGAGGAGCATGTGGGTACGGAAATCTGTTTCAGAATGGTTATGGGACAGACACAGCAGCTTTGAGTTCAACGTTGTTCAACAACGGGTATGCGTGTGGGACATGTTACCAGATAAAATGCTACCAATCAAGTGCATGCTATAAAAATGTGGCCTTCACTACTGTCACTGCCACCAACCTCTGCCCTCCTAATTGGTCCGAGCCCTCTGACGACGGTGGCTGGTGCAACCCCCCACGAGCGCATTTCGACATGTCAAAGCCCGCCTTCATGAAAATTGCTCAGTGGAAGGCTGGCATTGTCCCTGTCCTCTTCCGCAGGGTGCCATGCCAGAGGAAGGGTGGGCTAAGATTCACTTTCCAAGGGAATGGGTATTGGCTTTTGGTGTATGTGATGAATGTGGGAGGTGGAGGAGACATTTCTAGCATGTATGTGAAAGGAAGCAGAACAGGGTGGATTAGCATGAGCCATAATTGGGGAGCTTCATATCAGGCATTTGCATCACTCTCTGGGCAATCTCTTTCTTTTAGGGTCACTTCATACACCACCAAAGAAACTATTATTGCTTGGAATGTTGCTCCTTCTAATTGGAACGTTGGATTGACTTATTCCACCAACGTCAACTTCCACTGA 804 0.4714 MASTIVQPRSFLLFAFTLMFTIMTEPTPTLASQIIFRPSQWSLAHATFYGDETASATMGGACGYGNLFQNGYGTDTAALSSTLFNNGYACGTCYQIKCYQSSACYKNVAFTTVTATNLCPPNWSEPSDDGGWCNPPRAHFDMSKPAFMKIAQWKAGIVPVLFRRVPCQRKGGLRFTFQGNGYWLLVYVMNVGGGGDISSMYVKGSRTGWISMSHNWGASYQAFASLSGQSLSFRVTSYTTKETIIAWNVAPSNWNVGLTYSTNVNFH* 268
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev05g0930 267 ProSiteProfiles Expansin, family-45 endoglucanase-like domain profile. 59 172 IPR007112 -
Aev05g0930 267 PANTHER EXPANSIN-A15 4 267 IPR002963 GO:0009664
Aev05g0930 267 Gene3D - 173 267 IPR036749 -
Aev05g0930 267 ProSiteProfiles Expansin, Cellulose-binding-like domain profile. 182 262 IPR007117 -
Aev05g0930 267 Pfam Lytic transglycolase 76 161 IPR009009 -
Aev05g0930 267 Pfam Expansin C-terminal domain 174 251 IPR007117 -
Aev05g0930 267 Gene3D - 27 168 IPR036908 -
Aev05g0930 267 PRINTS Expansin signature 171 183 IPR002963 GO:0009664
Aev05g0930 267 PRINTS Expansin signature 111 121 IPR002963 GO:0009664
Aev05g0930 267 PRINTS Expansin signature 130 147 IPR002963 GO:0009664
Aev05g0930 267 PRINTS Expansin signature 71 85 IPR002963 GO:0009664
Aev05g0930 267 PRINTS Expansin signature 183 204 IPR002963 GO:0009664
Aev05g0930 267 PRINTS Expansin signature 218 239 IPR002963 GO:0009664
Aev05g0930 267 PRINTS Expansin signature 147 160 IPR002963 GO:0009664
Aev05g0930 267 PANTHER EXPANSIN 4 267 - -
Aev05g0930 267 SUPERFAMILY Barwin-like endoglucanases 40 190 IPR036908 -
Aev05g0930 267 PRINTS Expansin/Lol pI family signature 248 262 IPR007118 GO:0005576
Aev05g0930 267 PRINTS Expansin/Lol pI family signature 58 76 IPR007118 GO:0005576
Aev05g0930 267 PRINTS Expansin/Lol pI family signature 80 98 IPR007118 GO:0005576
Aev05g0930 267 PRINTS Expansin/Lol pI family signature 155 171 IPR007118 GO:0005576
Aev05g0930 267 PRINTS Expansin/Lol pI family signature 209 223 IPR007118 GO:0005576
Aev05g0930 267 PRINTS Expansin/Lol pI family signature 40 55 IPR007118 GO:0005576
Aev05g0930 267 SUPERFAMILY PHL pollen allergen 169 261 IPR036749 -
Aev05g0930 267 SMART dpbb_1 76 162 IPR007112 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev05g0930 Aev-Chr5 6544059 6545057 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev05g0930 16 267 Expansin Gene Family AT1G12560 67.857 1.51e-127 361
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev05g0930 - - gmx:100807807 485.723
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev05g0930 05 6544059 6545057 Aev05g0930 05 6544059 6545057 ECH
Aev01g1861 01 23588139 23592644 Aev05g0930 05 6544059 6545057 PCT