Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev05g0904 ATGGGTAAGGATCTGACTGACGAGCAAGTTTCTTCCATGAAGGAAGCTTTCACTCTCTTCGACACCGCCGGTAACGGTCGGATCGCTCCATCGGAGCTTGGAATCCTTATGCGCTCCCTGGGCGGGAACCCCACCCAGGCCCAACTCAAATCCATTATCGCCGAAGAGAACCTCACCGCACCGTTCGATTTCCCTCGATTTCTGGATCTGATGGCGAAGCACATGAAGCCTGAGCCGTTCGATCGCCAGCTCCGCGATGCATTCAAGGTCCTCGACAAGGATAACTCCGGCTACGTGTCCGTCACGGAGCTCCGCCACATCCTCACCAGCATCGGCGAGAAGCTCGAGCCCGCTGAGTTCGACGAGTGGATCAGAGAGGTCGACGTTGGCTCCGATGGCAAGATCCGCTACGAGGATTTCATCGCCAGAATGGGATTCAAATTCAACTTGCTTGGATTGATTGATGAGTATGTGAGGAAGGTAGGTTCTAGGGTTTTAGAAGAACAGTTGAGCAGTGGTGCAGCGTGCGGCGAGGCGGCGACAAACAGCAGTAGCACCATGGGTCGTATGCACAGTCGTGGTAAGGGTATATCCTCCTCTGCTCTGCCCTACAAGAGGACCCCTCCTAGCTGGCTCAAGATCTCTTCCCAAGATGTTGAAGAGAACATATGCAAGTTCGCAAAGAAGGGTTTGACACCATCGCAGATTGGTGTGATTCTCCGAGACTCTCACGGTATTGCTCAGGTCAAGAGCGTCACCGGCAGCAAGATCCTCCGCATTCTCAAAGCTCATGGACTTGCGCCTGAGATTCCTGAGGATCTTTACCATTTGATAAAGAAGGCAGTTTCAATCAGGAAGCATCTGGAAAGGAACAGGAAGGACAAGGACTCCAAGTTCAGGCTGATCCTTGTGGAGAGCAGAATCCACAGGCTTGCTCGCTACTACAAGAAAACTAAGAAGCTCCCCCCTGTCTGGAAATACGAATCAACAACAGCCAGCACTCTGGTTGCTTAG 1014 0.5256 MGKDLTDEQVSSMKEAFTLFDTAGNGRIAPSELGILMRSLGGNPTQAQLKSIIAEENLTAPFDFPRFLDLMAKHMKPEPFDRQLRDAFKVLDKDNSGYVSVTELRHILTSIGEKLEPAEFDEWIREVDVGSDGKIRYEDFIARMGFKFNLLGLIDEYVRKVGSRVLEEQLSSGAACGEAATNSSSTMGRMHSRGKGISSSALPYKRTPPSWLKISSQDVEENICKFAKKGLTPSQIGVILRDSHGIAQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVSIRKHLERNRKDKDSKFRLILVESRIHRLARYYKKTKKLPPVWKYESTTASTLVA* 338
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev05g0904 337 ProSitePatterns EF-hand calcium-binding domain. 92 104 IPR018247 -
Aev05g0904 337 ProSiteProfiles EF-hand calcium-binding domain profile. 79 114 IPR002048 GO:0005509
Aev05g0904 337 PANTHER RIBOSOMAL PROTEIN S15P/S13E 187 337 IPR023029 -
Aev05g0904 337 ProSitePatterns Ribosomal protein S15 signature. 284 314 IPR000589 GO:0003735|GO:0005840|GO:0006412
Aev05g0904 337 Pfam Ribosomal protein S15 260 330 IPR000589 GO:0003735|GO:0005840|GO:0006412
Aev05g0904 337 Gene3D - 3 79 - -
Aev05g0904 337 ProSiteProfiles EF-hand calcium-binding domain profile. 115 150 IPR002048 GO:0005509
Aev05g0904 337 Pfam EF-hand domain pair 82 144 IPR002048 GO:0005509
Aev05g0904 337 Pfam Ribosomal S13/S15 N-terminal domain 187 246 IPR012606 GO:0003735|GO:0005840|GO:0006412
Aev05g0904 337 MobiDBLite consensus disorder prediction 180 199 - -
Aev05g0904 337 Gene3D - 221 268 - -
Aev05g0904 337 ProSiteProfiles EF-hand calcium-binding domain profile. 8 43 IPR002048 GO:0005509
Aev05g0904 337 SMART efh_1 83 111 IPR002048 GO:0005509
Aev05g0904 337 SMART efh_1 12 40 IPR002048 GO:0005509
Aev05g0904 337 SMART efh_1 119 147 IPR002048 GO:0005509
Aev05g0904 337 SMART Ribosomal_S15_2 256 335 IPR000589 GO:0003735|GO:0005840|GO:0006412
Aev05g0904 337 CDD Ribosomal_S15p_S13e 256 329 IPR000589 GO:0003735|GO:0005840|GO:0006412
Aev05g0904 337 SMART Ribosomal_S13_N_2 187 246 IPR012606 GO:0003735|GO:0005840|GO:0006412
Aev05g0904 337 Gene3D - 81 144 - -
Aev05g0904 337 SUPERFAMILY S15/NS1 RNA-binding domain 252 328 IPR009068 -
Aev05g0904 337 Gene3D - 269 337 - -
Aev05g0904 337 SUPERFAMILY EF-hand 5 144 IPR011992 -
Aev05g0904 337 CDD EFh 83 144 IPR002048 GO:0005509
Aev05g0904 337 PANTHER 40S RIBOSOMAL PROTEIN S13 187 337 - -
Aev05g0904 337 Hamap 30S ribosomal protein S15 [rpsO]. 189 335 IPR023029 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev05g0904 Aev-Chr5 6381012 6386251 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev05g0904 187 337 Cytoplasmic Ribosomal Protein Gene Family AT4G00100 94.040 2.45e-101 293
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev05g0904 K02953 - ats:109750469 468.774
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev05g0904 05 6381012 6386251 Aev05g0904 05 6381012 6386251 ECH