Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev05g0898 ATGGCAGACGAAGCCAAAGCGAAAGGCAACGCCGCCTTCTCCTCCGGCGATTACGCCTCCGCAATCAGTCACTTCTCCGACGCCATCGCCCTCTCCCCCGACAACCACGTCCTCTACTCCAACCGATCCGCCGCCTACGCCTCCCTCCAAAAATACTCCGAAGCCTTAGCCGACGCCAAGAAGACCGTCGAGCTCAAACCCGACTGGTCAAAAGGCTACAGTCGCCTCGGCGCTGCACACCTTGGCCTCTCCCAATACAACGACGCTGTTTCCGCCTACAAGAAAGGCCTCGAAATCGACCCTAACAATGAACCCTTAAAATCCGGCCTCGCTGATGCCCAGGCCGCTGCTTCACGCTCCCGCTCGGCTCCCTCGCCCGCTAGCCCCTTTGGCGATGCCTTCTCCGGCCCCGAGATGTGGGCCCGGCTCACTGCTGACCCTACCACTAGGGCTTATCTTCAGCAACCTGATTTCGTGAAGATGATGCAGGATATTCAGAAGGATCCTAGCAAGCTGAACTTGTACTTGAAGGATCAGAGGGTGATGCAGGCCCTTGGTGTTCTGCTCAACGTTAAGATTCATACCCCAACTGATGATGCCGACATGGCGGAGTATGAGAGGAGGAGTTCCGCCGAAGCTGAGTCTCCGCAGCAGCCCAAGCCTCAGCCCGAGCCCGAGCCCGAACCTGAGCCCATGGAGGTGACGGAGGAGGAGAGAGGGAAGAAGGAGAGAAAGGCGGAGGCCCAGAGGGAGAAGGAAGCAGGGAATGCTGCATACAAGAAGAAGGACTTCGATACTGCGATTCAGCATTACACAAAGGCTTTGGAGTTGGATGATGAGGATATATCTTACCTCACCAACCGTGCCGCTGTTTACTTGGAAATGGGAAAGTATGAGGAATGCATAAAAGATTGTGACAAGGCTGTTGAAAGAGGAAGAGAACTTAGATCAGATTTCAAGATGATAGCAAGAGCTTTAACTAGAAAAGGAAATGCCTTGGTCAAGATGGCAAAATGCTCAAAGGATTATGACGCTGCCATTGAGACTTTCCAGAAAGCACTTACAGAGCACCGCAACCCAGACACTCTGAAGAAACTTAATGAAGCTGAGAAGGCTAAGAAGGATCTAGAGCAGCAAGAATATTTTGATCCACAATTGGCTGATGAGGAGCGAGAGAAAGGAAACGAATTCTTTAAGCAGCAAAAGTATCCTGAGGCTGTGAGGCATTACACAGAGGCTATAAGGAGAAACCCTAACGATCATAGGGCTTATAGTAACAGGGCTGCATGCTACACTAAACTGGGGGCAATGCCTGAAGGTTTGAAGGATGCAGAAAAGTGCATTGAACTTGAGCCTACTTTTGCAAAGGGCTATACTAGGAAAGGTGCTGTACAATTTTTCATGAAAGAATATGACAAGGCTTTGGAAACATACAAGGAGGGTTTGAAACATGACCCTAACAATCAGGAGTTACTTGATGGCATTGGAAGATGTGTACAACAAATTAATAAGGCAAGCCGTGGGGATCTAACTCCTGAGGAATTGAAGGAAAGACAGGCCAAGGCTATGCAGGACCCAGAGATTCAGAGCATCCTTCAAGACCCTGTCATGAGACAGGTATTGGTTGATTTCCAGGAGAATCCTAAAGCTGCACAGGAACATACGAAGAATCCAATGGTGATGAACAAAATCCAAAAACTTATCAGTGCAGGAATTGTCCAAATGAGGGTTTTCGTTCACTTCACTGTTCTCCAAATCGCAGTTGCTGCTCTTCATGGCTAA 1782 0.4961 MADEAKAKGNAAFSSGDYASAISHFSDAIALSPDNHVLYSNRSAAYASLQKYSEALADAKKTVELKPDWSKGYSRLGAAHLGLSQYNDAVSAYKKGLEIDPNNEPLKSGLADAQAAASRSRSAPSPASPFGDAFSGPEMWARLTADPTTRAYLQQPDFVKMMQDIQKDPSKLNLYLKDQRVMQALGVLLNVKIHTPTDDADMAEYERRSSAEAESPQQPKPQPEPEPEPEPMEVTEEERGKKERKAEAQREKEAGNAAYKKKDFDTAIQHYTKALELDDEDISYLTNRAAVYLEMGKYEECIKDCDKAVERGRELRSDFKMIARALTRKGNALVKMAKCSKDYDAAIETFQKALTEHRNPDTLKKLNEAEKAKKDLEQQEYFDPQLADEEREKGNEFFKQQKYPEAVRHYTEAIRRNPNDHRAYSNRAACYTKLGAMPEGLKDAEKCIELEPTFAKGYTRKGAVQFFMKEYDKALETYKEGLKHDPNNQELLDGIGRCVQQINKASRGDLTPEELKERQAKAMQDPEIQSILQDPVMRQVLVDFQENPKAAQEHTKNPMVMNKIQKLISAGIVQMRVFVHFTVLQIAVAALHG* 594
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev05g0898 593 MobiDBLite consensus disorder prediction 234 258 - -
Aev05g0898 593 Gene3D - 505 576 - -
Aev05g0898 593 PANTHER TPR REPEAT CONTAINING PROTEIN 1 575 IPR045248 GO:0006457|GO:0030544|GO:0051879
Aev05g0898 593 SMART tpr_5 70 103 IPR019734 GO:0005515
Aev05g0898 593 SMART tpr_5 282 315 IPR019734 GO:0005515
Aev05g0898 593 SMART tpr_5 323 360 IPR019734 GO:0005515
Aev05g0898 593 SMART tpr_5 36 69 IPR019734 GO:0005515
Aev05g0898 593 SMART tpr_5 455 488 IPR019734 GO:0005515
Aev05g0898 593 SMART tpr_5 248 281 IPR019734 GO:0005515
Aev05g0898 593 SMART tpr_5 387 420 IPR019734 GO:0005515
Aev05g0898 593 SMART tpr_5 421 454 IPR019734 GO:0005515
Aev05g0898 593 SMART tpr_5 2 35 IPR019734 GO:0005515
Aev05g0898 593 Coils Coil 359 379 - -
Aev05g0898 593 ProSiteProfiles TPR repeat profile. 2 35 IPR019734 GO:0005515
Aev05g0898 593 ProSiteProfiles TPR repeat profile. 455 488 IPR019734 GO:0005515
Aev05g0898 593 ProSiteProfiles TPR repeat region circular profile. 70 103 - -
Aev05g0898 593 Pfam STI1 domain 517 568 IPR041243 -
Aev05g0898 593 Pfam STI1 domain 137 190 IPR041243 -
Aev05g0898 593 Pfam Tetratricopeptide repeat 7 67 - -
Aev05g0898 593 ProSiteProfiles TPR repeat profile. 248 281 IPR019734 GO:0005515
Aev05g0898 593 ProSiteProfiles TPR repeat profile. 70 103 IPR019734 GO:0005515
Aev05g0898 593 ProSiteProfiles TPR repeat profile. 387 420 IPR019734 GO:0005515
Aev05g0898 593 SUPERFAMILY TPR-like 8 500 IPR011990 GO:0005515
Aev05g0898 593 MobiDBLite consensus disorder prediction 101 133 - -
Aev05g0898 593 Coils Coil 232 252 - -
Aev05g0898 593 Pfam TPR repeat 394 435 - -
Aev05g0898 593 Pfam TPR repeat 255 296 - -
Aev05g0898 593 Pfam Tetratricopeptide repeat 71 103 IPR001440 GO:0005515
Aev05g0898 593 Pfam Tetratricopeptide repeat 455 488 IPR001440 GO:0005515
Aev05g0898 593 Gene3D Tetratricopeptide repeat domain 245 381 IPR011990 GO:0005515
Aev05g0898 593 ProSiteProfiles TPR repeat profile. 36 69 IPR019734 GO:0005515
Aev05g0898 593 SMART CBM 136 175 IPR006636 -
Aev05g0898 593 SMART CBM 525 564 IPR006636 -
Aev05g0898 593 MobiDBLite consensus disorder prediction 203 258 - -
Aev05g0898 593 Gene3D - 126 193 - -
Aev05g0898 593 PANTHER HSP70-HSP90 ORGANIZING PROTEIN 3 1 575 - -
Aev05g0898 593 Gene3D Tetratricopeptide repeat domain 385 500 IPR011990 GO:0005515
Aev05g0898 593 Gene3D Tetratricopeptide repeat domain 1 116 IPR011990 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev05g0898 Aev-Chr5 6350198 6355058 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev05g0898 386 498 U-box Gene Family AT3G07370 27.434 1.24e-06 48.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev05g0898 K09553 - gmx:100776102 936.021