Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev05g0894 ATGGGGCCAATGGACTTGAACACCTCCCATCATGTATCCCCTGTTCTTACCGATCCTGTACCGGTCAACAAGTCAAGGCTAGGAATCCACTCTAGTGTGCTAGCTTGCTCCCAGCAGCAAGATTCATCATCATCATCATCACTACCCATATCAGGGAAGTATTCAAGAACTAGCTCAAGAAAAAATGGAGGAAGCATTGATGATGTTCGTCTCAATGGCTGGTTAGATGCCATGAAGGCCTCTTCACCTCCAAGGAAGAAGCTACCTAATAATAGAGCATCCATTGCTCAGGTAGCAGCTTCAATTGACTATGACATTATTGAAGACTATCACTCATTGATGGTTGATTATCCTTCAGCACTAGACTCATTCGAGAAAATCATTGACCGTGCAAAGAATAAGAAGGTTGCAATTTTTCTAGATTACGATGGCACTCTTTCGCCAATAGTAGATGATCCTGACTCTGCCTTTATGTCTGAAGCAATGCGTACCACTGTGAAAAGTCTGGCAATGTATTTTTCCACGGCAATTATCAGTGGAAGAAGCCTTGACAAGGTTTTTGATTTAGTTAAATTAAAGGAACTCTACTATGCGGGTAGTCATGGGATGGACATTACTGGACCTTTTCATCATCACACACTGTCCATGTCCAATAATAATCACCCGAATTGTGTCAATCAGGGAAATGAGATAACTCTCTTTCAACCTGCTAGGGAGTTCCTGCCTATGATTGACGAGGTTTTTAGAACCCTCGTCGAGATTACTAAAGATATAAAAGGTGCAAAAGTTGAAAATCACAAGTTTTGCGCCTCTGTACATTACCGTAATGTAGAGGAGAATAATTGGACAATTATTGGACAGCGTGTCCATGATATACTGAAAAGTTACCCACGTTTACGTTCAACTCATGGACGGAAGGTTTTAGAGGTCCGTCCTGTGATTGACTGGAACAAGGGAAAAGCAGTTGAATTTTTACTTGATTCTCTAGGGTTAAACGATGGGGATGATGTGTTCCCCATCTATATTGGAGATGATAAAACCGATGAAGATGCTTTCAAGGTTCTGCGTGAGAGCAATCGAGGTTGTGGGATTTTGGTTTCTTCTGTCAAGAAAGAAAGCACTGCTTTCTACTCTCTACGGGACCCCACTGAGGTAATGAAATTTCTCCAGCGCCTAGTTAATTGGAAGCGGCAAGGAAAATAA 1203 0.419 MGPMDLNTSHHVSPVLTDPVPVNKSRLGIHSSVLACSQQQDSSSSSSLPISGKYSRTSSRKNGGSIDDVRLNGWLDAMKASSPPRKKLPNNRASIAQVAASIDYDIIEDYHSLMVDYPSALDSFEKIIDRAKNKKVAIFLDYDGTLSPIVDDPDSAFMSEAMRTTVKSLAMYFSTAIISGRSLDKVFDLVKLKELYYAGSHGMDITGPFHHHTLSMSNNNHPNCVNQGNEITLFQPAREFLPMIDEVFRTLVEITKDIKGAKVENHKFCASVHYRNVEENNWTIIGQRVHDILKSYPRLRSTHGRKVLEVRPVIDWNKGKAVEFLLDSLGLNDGDDVFPIYIGDDKTDEDAFKVLRESNRGCGILVSSVKKESTAFYSLRDPTEVMKFLQRLVNWKRQGK* 401
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev05g0894 400 CDD HAD_TPP 137 387 - -
Aev05g0894 400 Pfam Trehalose-phosphatase 139 382 IPR003337 GO:0003824|GO:0005992
Aev05g0894 400 PANTHER TREHALOSE-PHOSPHATE PHOSPHATASE F-RELATED 4 398 - -
Aev05g0894 400 MobiDBLite consensus disorder prediction 1 20 - -
Aev05g0894 400 TIGRFAM T6PP: trehalose-phosphatase 134 393 IPR003337 GO:0003824|GO:0005992
Aev05g0894 400 Gene3D - 138 379 IPR023214 -
Aev05g0894 400 SUPERFAMILY HAD-like 137 397 IPR036412 -
Aev05g0894 400 Gene3D - 220 313 - -
Aev05g0894 400 MobiDBLite consensus disorder prediction 36 65 - -
Aev05g0894 400 PANTHER TREHALOSE 6-PHOSPHATE PHOSPHATASE 4 398 IPR044651 GO:0004805|GO:0005992
Aev05g0894 400 TIGRFAM HAD-SF-IIB: HAD hydrolase, family IIB 137 356 IPR006379 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev05g0894 Aev-Chr5 6313742 6316347 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev05g0894 132 392 Trehalose Biosynthesis Gene Families AT1G70290 25.632 1.40e-08 55.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev05g0894 K01087 - tcc:18606311 500.745