Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev05g0877 ATGGATGAACCGAACGAATCACCAGAAAACAGAGAACTCTACGCTCTCCTCAACTTGTCACCAGAAGCTTCTGATGAAGAAATCCGAAGAGCTTATCGTCAATGGGCGCAAGTTTATCATCCTGATAAATACCAAGCTCCTCACATGAAAGATATTGCGACGGAGAACTTCCAGCGCATATGTGAAGCGTATGAGATTTTGTCAGATCCAAACAAGAGGCAAATATATGATATCTATGGCATGGAAGGGTTGAATTCTGGTTTGGAACTTGGTCCGAGGCTGAATAGAGTGGAAGAGATCAAGGCGGAGCTGGAGAGGCTGAAGAGGATGAAGGAACAAGAGAAGATGAAGGCACATTTTCAATCTTCGGGTACAATTCTCGCCAATATGTCTTTGCCACACTGTCTAAATGGTGTTGGCCTATTCAGAGGAATGGCCATGACAAGTGAAATTCAGTCCAACTTATCAAAGCGTGATGCTGTTACAATTGGTGGCAATTTAGAAGTAGACGGAAAGGAAGGTGGGGGAGCTGCCACTGCATTATTTAGGCATCAAATTTCAGAAGTTTCGTCAATAGAATTTGTGGCTTCAGCTGGTTTACGTGCACTAATTGGAGTACAAACATCTCGTACTTTATCATCCCACTCAGCTGCAACAATGGGCATTGCAATGTCATTGCGAGATGGTTCATTGAATCTTTCAAATTTATGGACCCGCCAACTGTCTGAAACAGCAAGTGGACATATACAGCTTGCTTTGGGATCCCAATCATCTATAGCTGTGGGCTGGCAAAAGAAAGATGAGAGAAGGTCTGCTTCTGGAGAAGTGAAGTTTGGCACAAGTTCTTTTGAGACAGCAGTTCATTATACTCACCGCTTTTCTCCTAAATCGCTTGGCTGCATTGCAGGAAGATTAGGGAGTTCTTCCCTTGAGATTGAAGTTGGTGGTGGGAGGAAGATATCCAGATTCAGCTCCGTGCGCTGGTTGTATACAATAGGAATTCAGGGTATTTTCTGGAAATTCGAACTACATCGTGGGGGCCAAAAGTTAATTATTCCTATTTTGCTAACAAGGCATTTGAACCCTATGTTTGCAACGGGGGCATTGATTGTTCCAGCATCTACATACTTTCTGGTTAAGAAATTTTTTATTAAACCCTATTACCTTAGAAGGAATAAGCAGAAGGCTCTAGAAAAGGAAGAGAAAACTTCTTCTCAGGTTAAGGAAGCAAGGGCTGCAGCGGAGAAAGCTCAGAAATTACAAGAAAATGTGGCTAACAGGAAAAGAAACAAGCAATTAGAAATAGATGGGCTGGTTATTATGAAAGCACTATATGGAAATCAAAGGATATTGAACAGCATGCATTCAACAAGTGAAACGAGTTTTGATTCAACTTCAGAAGTCATGGATGTTACAATACCTTTGAATTTTCTAGTTAACGATTCTGGCCAACTCAAGCTTCATGAAGGTGTGAAAAAATCAGGCATCATGGGCTTTTGTGATCCATGCCCAGGAGAGCCTAAACAGTTGTATGTAGAGTACGCTTATGCTGGCAATCATCACAAGTGTCCTGTGCCTGAAGGACACGTGGCGAGGTTCTTACAGAGTCAGAAGCCATCGGAATTTGGAAGTTGCATCTTGCATCCAATGCGAAGCGATGATAAGGTCGTTGCTTTCCAGGACATTAGTCCTTCTGCTTTCAGGCATTACTTAGTAATTCCTGTGGAGCACATTCCTACTGTTAACGATCTCCAGAGAAAGACTGAAGACTATTCTTTGGTGAGTCACATGTTAGAGGTGGGGAAAATGTTATTACTTAGAGATGCACCTCAGTCCAACCACCACAGATTTGGCTTTCATCAGCCTCCCCTGAACTCTGTTAACCACCTACACCTGCATTGTTTTGCCCTACCATATACACCCAGATGGAGATTTATAAAATACTTGTCTCTTGGACCAATTGGTTTCATTGAAGCGGAGAGGCTTCTGGAAAAGATAAAGCCTTTACCCGCAGCTCATTCAAAAGTGTAA 2031 0.4249 MDEPNESPENRELYALLNLSPEASDEEIRRAYRQWAQVYHPDKYQAPHMKDIATENFQRICEAYEILSDPNKRQIYDIYGMEGLNSGLELGPRLNRVEEIKAELERLKRMKEQEKMKAHFQSSGTILANMSLPHCLNGVGLFRGMAMTSEIQSNLSKRDAVTIGGNLEVDGKEGGGAATALFRHQISEVSSIEFVASAGLRALIGVQTSRTLSSHSAATMGIAMSLRDGSLNLSNLWTRQLSETASGHIQLALGSQSSIAVGWQKKDERRSASGEVKFGTSSFETAVHYTHRFSPKSLGCIAGRLGSSSLEIEVGGGRKISRFSSVRWLYTIGIQGIFWKFELHRGGQKLIIPILLTRHLNPMFATGALIVPASTYFLVKKFFIKPYYLRRNKQKALEKEEKTSSQVKEARAAAEKAQKLQENVANRKRNKQLEIDGLVIMKALYGNQRILNSMHSTSETSFDSTSEVMDVTIPLNFLVNDSGQLKLHEGVKKSGIMGFCDPCPGEPKQLYVEYAYAGNHHKCPVPEGHVARFLQSQKPSEFGSCILHPMRSDDKVVAFQDISPSAFRHYLVIPVEHIPTVNDLQRKTEDYSLVSHMLEVGKMLLLRDAPQSNHHRFGFHQPPLNSVNHLHLHCFALPYTPRWRFIKYLSLGPIGFIEAERLLEKIKPLPAAHSKV* 677
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev05g0877 676 Coils Coil 94 117 - -
Aev05g0877 676 SMART dnaj_3 11 72 IPR001623 -
Aev05g0877 676 Pfam DnaJ-like protein C11, C-terminal 386 525 IPR024586 -
Aev05g0877 676 SUPERFAMILY Chaperone J-domain 9 84 IPR036869 -
Aev05g0877 676 Pfam Scavenger mRNA decapping enzyme C-term binding 552 642 - -
Aev05g0877 676 PANTHER CHAPERONE PROTEIN DNAJ 13 1 523 IPR042162 -
Aev05g0877 676 PRINTS DnaJ domain signature 32 47 IPR001623 -
Aev05g0877 676 PRINTS DnaJ domain signature 52 72 IPR001623 -
Aev05g0877 676 PRINTS DnaJ domain signature 14 32 IPR001623 -
Aev05g0877 676 PRINTS DnaJ domain signature 72 91 IPR001623 -
Aev05g0877 676 ProSiteProfiles dnaJ domain profile. 12 80 IPR001623 -
Aev05g0877 676 Pfam DnaJ domain 13 77 IPR001623 -
Aev05g0877 676 Gene3D DnaJ domain 4 90 IPR036869 -
Aev05g0877 676 SUPERFAMILY HIT-like 548 656 IPR036265 -
Aev05g0877 676 Coils Coil 397 430 - -
Aev05g0877 676 ProSiteProfiles HIT domain profile. 529 645 IPR011146 GO:0003824
Aev05g0877 676 ProSitePatterns Nt-dnaJ domain signature. 57 76 IPR018253 -
Aev05g0877 676 Gene3D - 537 675 IPR036265 -
Aev05g0877 676 CDD DnaJ 12 69 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev05g0877 Aev-Chr5 6145918 6155942 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev05g0877 9 77 C2H2 Transcription Factor Family AT1G74250 45.070 5.14e-08 54.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev05g0877 K09531 - gmx:100817782 894.804
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev05g0877 05 6145918 6155942 Aev05g0877 05 6145918 6155942 ECH