Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev05g0874 ATGGCTTGTCTCTCTTTATTCGTCTCGCTTCGAGTGCTACTTTTGGCTTTCATTTTCGCACTATTACTTCATCATCATGCAGCAACAGTAGTAACTCGTAGCACCACCTTCACAACGAATTCCTCCTCCAATGGGAAGAACCAGAGTTGGGTGGGACCCACCGGTAATCGTGTAATCACCGTTGACGTTAACGGAGGTGGGCAGTTCCGGTCCGTCCAAGACGCCGTCAATGCCGTCCCAGACAACAATAGAATGAACGTCCTCATTCAGATCAGCGCCGGATACTACATAGAGAAGGTGGTGGTGCCGGGGACGAAGCCGTACATAACATTTGAAGGGGAAGGGAAGGAAGTGACGGTTATAGAATGGCATGATAGAGCTAGCGACCCTGGTCCCAACGGCCAGCAGCTTCGTACTTACAGAACTGCCTCTGTTACTGTTTTTGCCGCCTATTTCTCCGCTAGGAACATCTCCTTCAAGACCACAGCACCAGCACCAATGCCGGGGATGCAGGGATGGCAAGCGGCGGCGTTTAGGATATCAGGGGACAAAGCCTACTTCTCCGGTTGTGGCTTCTACGGTGCACAGGACACTCTCTGCGACGACGCTGGCAGGCATTACTTCAAGGAATGCTACATCCAAGGCTCCATTGACTTCATTTTTGGCAATGGCAGGTCCATGTACAAGGATTGCGAGCTACACTCAATAGCAACGAGGTTCGGATCAATAGCAGCCCAGGATAGGAAAAGTGCAGAGGAGAAGACAGGGTTCGCTTTCGTGAGATGCAAGGTGACGGGAACAGGCCCGGTCTATGTGGGCAGAGCAATGGGGCAGTTCTCCAGAATTGTCTTCTCCTACACATATTTCGATGACATTGTTGCCCATGGTGGTTGGGATGATTGGGACCATGCCAACAACAACACCAAGACGGTGTTCTTCGGAGTGTACAAGTGTTGGGGACCAGGAGCAGATGCAGTACGAGGGGCCTCATGGGCCCGTGAGCTAGATTTCGAATCAGCCCACCCATTTATCCGCAAAAGCTTCGTCAATGGGAGACATTGGATCGTACCCTCTGATGCTTAG 1083 0.5162 MACLSLFVSLRVLLLAFIFALLLHHHAATVVTRSTTFTTNSSSNGKNQSWVGPTGNRVITVDVNGGGQFRSVQDAVNAVPDNNRMNVLIQISAGYYIEKVVVPGTKPYITFEGEGKEVTVIEWHDRASDPGPNGQQLRTYRTASVTVFAAYFSARNISFKTTAPAPMPGMQGWQAAAFRISGDKAYFSGCGFYGAQDTLCDDAGRHYFKECYIQGSIDFIFGNGRSMYKDCELHSIATRFGSIAAQDRKSAEEKTGFAFVRCKVTGTGPVYVGRAMGQFSRIVFSYTYFDDIVAHGGWDDWDHANNNTKTVFFGVYKCWGPGADAVRGASWARELDFESAHPFIRKSFVNGRHWIVPSDA* 361
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev05g0874 360 Pfam Pectinesterase 59 351 IPR000070 GO:0030599|GO:0042545
Aev05g0874 360 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 24 359 - -
Aev05g0874 360 ProSitePatterns Pectinesterase signature 2. 213 222 IPR033131 -
Aev05g0874 360 PANTHER PECTINESTERASE 68-RELATED 24 359 - -
Aev05g0874 360 Gene3D - 54 359 IPR012334 -
Aev05g0874 360 SUPERFAMILY Pectin lyase-like 55 356 IPR011050 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev05g0874 Aev-Chr5 6125934 6128919 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev05g0874 4 360 Carbohydrate Esterase AT5G47500 70.588 0.0 535
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev05g0874 - - cam:101501763 617.846
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev05g0874 05 6125934 6128919 Aev05g0874 05 6125934 6128919 ECH