Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev05g0861 ATGGGTGCCTACAAGTATGTTTCGGAGCTATGGCGCAAGAAGCAGTCTGATGTCATGAGGTTCTTGCAGCGGGTGAGGTGCTGGGAGTATCGTCAGCAGCCTTCCATTGTTCGTTTGACAAGGCCTACACGCCCTGACAAGGCACGTCGCTTGGGCTACAAGGCCAAGCAGGGTTATGTGGTTTACCGTGTTCGTGTTCGAAGGGGTGGGCGTAAGAGGCCAGTGCCCAAAGGTATTGTTTATGGGAAGCCCACAAATCAGGGTGTTACCCAACTTAAGTTTCAGCGTAGCAAGAGGTCTGTTGCTGAGGAGAGAGCTGGACGTAAGCTGGGTGGCCTTAGGGTCCTCAATTCTTATTGGGTGAACGAGGACTCAACATACAAATACTTCGAGATCATTCTGGTGGATGTTGCCCATGCTGCTATCAGAAACGATCCAAGAATCAATTGGCTCTGCAATCCAGTGCACAAACACAGGGAGTTGCGTGGTCTTACCTCAGCTGGGAAGAGCAACAGAGGTTTACGTGGCAGAGGACACCTGTACCACAAAGCACGTCCATCCCGCAGAGCAACCTGGAAGAGAAACAATTCCCTTTCCCTTCTTCGTTACCGTTGA 615 0.5122 MGAYKYVSELWRKKQSDVMRFLQRVRCWEYRQQPSIVRLTRPTRPDKARRLGYKAKQGYVVYRVRVRRGGRKRPVPKGIVYGKPTNQGVTQLKFQRSKRSVAEERAGRKLGGLRVLNSYWVNEDSTYKYFEIILVDVAHAAIRNDPRINWLCNPVHKHRELRGLTSAGKSNRGLRGRGHLYHKARPSRRATWKRNNSLSLLRYR* 205
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev05g0861 204 PANTHER RIBOSOMAL PROTEIN L15 1 204 IPR000439 GO:0003735|GO:0005840|GO:0006412
Aev05g0861 204 Pfam Ribosomal L15 2 190 IPR000439 GO:0003735|GO:0005840|GO:0006412
Aev05g0861 204 MobiDBLite consensus disorder prediction 166 187 - -
Aev05g0861 204 ProSitePatterns Ribosomal protein L15e signature. 46 69 IPR020925 GO:0003735|GO:0005840|GO:0006412
Aev05g0861 204 PANTHER RIBOSOMAL PROTEIN L15 1 204 - -
Aev05g0861 204 SMART Ribosomal_L15e_2 2 193 IPR000439 GO:0003735|GO:0005840|GO:0006412
Aev05g0861 204 Gene3D Ribosomal protein l15e 1 204 IPR024794 GO:0003735|GO:0005840
Aev05g0861 204 SUPERFAMILY Ribosomal proteins S24e, L23 and L15e 1 195 IPR012678 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev05g0861 Aev-Chr5 6035864 6038345 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev05g0861 1 204 Cytoplasmic Ribosomal Protein Gene Family AT4G16720 91.667 1.62e-126 353
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev05g0861 K02877 - gmx:100305473 387.497
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev05g0861 05 6035864 6038345 Aev05g0861 05 6035864 6038345 ECH
Aev05g0861 05 6035864 6038345 Aev01g0357 01 3012163 3013531 PCT