Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev05g0860 ATGGCACCAAACAATGATGAATCAACTAAGAAAACATATAACAGAGGAGCATGGACCCCTGAGGAAGACCAAAAGCTAGCCCAATGCATCGAGATTCACGGTGCTAAGAGGTGGAAGACCGTTGCATCCAAATCAGGTCTAAATAGATGTGGAAAGAGTTGCAGGCTGAGATGGTTGAATTATTTGAGACCTAATATTAAGAGGGGCAACATATCAGATGAAGAAGAGGATTTGATCATAAGGCTTCACAAATTGCTAGGAAACAGGTGGTCTTTGATAGCTAAGAGGCTTCCAGGACGAACAGACAATGAAATTAAGAACTACTGGAATTCTTGTTTGTGCAAAAAAGTGAATCACAAAGAGGAGTTAAAACCAGAACCTTCATCAACAGCACAAGAAACTAGTGCGATTCAGAACACTGGGGACATGGCAGTAGCAGGGAATGAGGATGCCATTTATGGAATTGGGGACTCGGAATTCAACTTTGATGTGAACCAATTCTTCGACTTCTCAACACCATATGCTTTGGATTGGATTCGTCGATTCTTTACACCTGGTGGTTCTGATCGGCAAAAGGTGGAGGAAAAAATGGTGGAAACAAAACCTGAAAAAATTAGCTTACCTGCTTATGATACATCTGCTATGAAAAATCCTGAAGATTTGGATTGGAGTGATGAATTTGACAATGATTTCTATACAATCCCTGATGCCCTCCCTGTTCAAAGAATCAACATACTTCCGGAGGCTACCACTACAAACAAAGCAGATGAAGATAGCAAAATTAAAGCCTTGAATGATTTGAATTGGCAAAGTATGGGCTTTGAGTTTGACACTGGTAGAGGTTTTGGAAGGGGTAAGAGAGGAGCAATTGGAGCTGGACATGGTTTTGGGTTTGAGAAGAAAACTCCACCACAAGGCTATATATGTCACAGATGCAAGGTTCCTGGACATTTTATTCAGCATTGCCCCACAAATGGTGATCCTAATTATGATATTAGTAGAGTCAAGCAGCCTTCTGGAATTCCGCGATCCATGCTGGTGGTAAATTCAAATGGTTCTTATACTTTACCAAATGGCACAGTTGCTGCACTAAACCCAAACGAGGCTGCATTTGAGAAAGAAATGGAAGGGTTGCCATCAACTCGTTCGGTTGGTCATCTACCACCAGAGTTCCACTGCCCCTTCTGTAGTAATGTGATGAAAGATGCTGTACTGACAAGCAAGTGTTGTTTCAAAAGCTTTTGTGACAAATGTATTCGGGACTATATTACCTCCAAGTCCATGTGCATTTGTGGTGCAACAAATATTCTTGCAGATGATCTCTTGCCAAATAAGACACTTAGAGATACAATTAATCGCATGTTGGAATCAGATAATAGCAGTACTGGGAAATCCGGGATAACTTTTCAAGAGACACAGTCTGCTCCCCGTCTAATGTCGTCTTCAACTTCATCTGCTGCTTCCGAGCGAGAACCTAAGGTGTTACCTACTACTGAAGGAACATCAAATATACAGGAATCAGCCAGTGATACAAAGTTTGTTTCTGCTCCACAACAGAAATCAGAGGAAGTAATGGTTAGAAAATATGCTAATATATCTGAAAGTACTCCCGAGTCAATGAATGTAAAGGAACCCGCTTCTCAAGGGAATGGTCAGCTGGTTAAGGGAGATAGGTCACAAATATTGGTCCCTAGTGAAGCAGAAAAGAAAAGGAAAAGACAGAAAGTCTGCTTGCCTGAAAATGATATGCAGCGGAAAACATCACAAGATTTTGGAGCTGAGAATCATATGATGCCAATGGTCTCCCCAGGCTATAATTCCTACTGGAATGGCATGCAACCTGGAATGGGAGGAGTTATGGGACCATATACAAGTCCAATGCAAATGATGGGTTATGGTTTAGGACCATTCAATATGCCGTTCGCAAGTATTCCTCCTCAACATATGTTTGGCATGCAGGGTTATATGTTTCCGGTTGCTCCACCTAAAAGGGATCCCAAAGATCAAGAGTTTGGTAGGGGTGCAAGCACTGTCAGGGACATTTCTTCAGTGAAATCGAAAAATATATCGATTCCTCCACAAAGTCAGAAATTCTACACTCACCATTCAGAGGGCGAAGTCACTCGCAAGAGAAAGGTTTCAAGTAATTCAGTTCAGTATGACAGTTCAAGAAATACGAGGCATTAA 2187 0.4156 MAPNNDESTKKTYNRGAWTPEEDQKLAQCIEIHGAKRWKTVASKSGLNRCGKSCRLRWLNYLRPNIKRGNISDEEEDLIIRLHKLLGNRWSLIAKRLPGRTDNEIKNYWNSCLCKKVNHKEELKPEPSSTAQETSAIQNTGDMAVAGNEDAIYGIGDSEFNFDVNQFFDFSTPYALDWIRRFFTPGGSDRQKVEEKMVETKPEKISLPAYDTSAMKNPEDLDWSDEFDNDFYTIPDALPVQRINILPEATTTNKADEDSKIKALNDLNWQSMGFEFDTGRGFGRGKRGAIGAGHGFGFEKKTPPQGYICHRCKVPGHFIQHCPTNGDPNYDISRVKQPSGIPRSMLVVNSNGSYTLPNGTVAALNPNEAAFEKEMEGLPSTRSVGHLPPEFHCPFCSNVMKDAVLTSKCCFKSFCDKCIRDYITSKSMCICGATNILADDLLPNKTLRDTINRMLESDNSSTGKSGITFQETQSAPRLMSSSTSSAASEREPKVLPTTEGTSNIQESASDTKFVSAPQQKSEEVMVRKYANISESTPESMNVKEPASQGNGQLVKGDRSQILVPSEAEKKRKRQKVCLPENDMQRKTSQDFGAENHMMPMVSPGYNSYWNGMQPGMGGVMGPYTSPMQMMGYGLGPFNMPFASIPPQHMFGMQGYMFPVAPPKRDPKDQEFGRGASTVRDISSVKSKNISIPPQSQKFYTHHSEGEVTRKRKVSSNSVQYDSSRNTRH* 729
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev05g0860 728 MobiDBLite consensus disorder prediction 660 728 - -
Aev05g0860 728 PANTHER E3 UBIQUITIN LIGASE PQT3-LIKE 191 665 - -
Aev05g0860 728 MobiDBLite consensus disorder prediction 455 519 - -
Aev05g0860 728 Pfam Myb-like DNA-binding domain 68 112 IPR001005 -
Aev05g0860 728 Pfam Myb-like DNA-binding domain 15 62 IPR001005 -
Aev05g0860 728 PANTHER RETINOBLASTOMA-BINDING PROTEIN 6 191 665 IPR033489 GO:0006397|GO:0016567|GO:0061630
Aev05g0860 728 MobiDBLite consensus disorder prediction 712 728 - -
Aev05g0860 728 MobiDBLite consensus disorder prediction 535 555 - -
Aev05g0860 728 MobiDBLite consensus disorder prediction 679 701 - -
Aev05g0860 728 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 372 472 IPR013083 -
Aev05g0860 728 SUPERFAMILY Retrovirus zinc finger-like domains 293 327 IPR036875 GO:0003676|GO:0008270
Aev05g0860 728 SMART sant 14 64 IPR001005 -
Aev05g0860 728 SMART sant 67 115 IPR001005 -
Aev05g0860 728 Gene3D - 7 68 - -
Aev05g0860 728 SUPERFAMILY RING/U-box 383 456 - -
Aev05g0860 728 Gene3D - 71 140 - -
Aev05g0860 728 CDD vRING-HC-C4C4_RBBP6 388 429 - -
Aev05g0860 728 Gene3D - 301 350 - -
Aev05g0860 728 CDD SANT 17 62 IPR001005 -
Aev05g0860 728 CDD SANT 72 110 IPR001005 -
Aev05g0860 728 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 10 66 IPR017930 -
Aev05g0860 728 Pfam Zinc knuckle 304 324 IPR025829 -
Aev05g0860 728 SUPERFAMILY Homeodomain-like 14 109 IPR009057 -
Aev05g0860 728 ProSiteProfiles Myb-like domain profile. 10 62 IPR001005 -
Aev05g0860 728 ProSiteProfiles Myb-like domain profile. 63 113 IPR001005 -
Aev05g0860 728 MobiDBLite consensus disorder prediction 455 518 - -
Aev05g0860 728 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 67 117 IPR017930 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev05g0860 Aev-Chr5 6027078 6034838 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev05g0860 13 117 MYB Transcription Factor Family AT5G40330 66.667 1.54e-47 166
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Aev05g0860 Myb_DNA-binding 1.2e-17 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev05g0860 - K10624 gmx:100798536 652.514
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev05g0860 05 6027078 6034838 Aev05g0860 05 6027078 6034838 ECH
Aev05g0860 05 6027078 6034838 Aev01g0361 01 3035829 3038172 PCT