Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev05g0859 ATGGACATGGAGGAACACCACCAACAACCACTCACTCCTCAGCACACAGCCACCACCACTCCCTCGTCATCCTCTTCCTCCACCGAGGAACTACCTTATACAGCAACAGAAGCCATTAATTCATCAGCCACCAACGAAATAATACATCAAGGAAAAAAGGAGAAGGTAGTGAAGAAGAAGGTGGGCAGTGATGGGAAGCACCCTACTTACCGCGGAGTACGGATGCGCCAATGGGGGAAATGGGTCTCAGAAATCAGAGAGCCAAAGAAAAAATCCAGAATTTGGCTTGGCACTTTCCCCACGCCGGAGATGGCGGCTCGAGCCCACGACGTTGCGGCTCTAGCCATCAAAGGCGGCTCCGCTTTCCTCAATTTCCCCGAACTTGCCCCGCTCCTTCCTCGTCCGGCCACCACTTCCCCTAAGGACATTCAAGCCGCCGCCGCCAAGGCCGCCGCAATAAGCTACGGAACGAGCAATGAAGCCGAGCCGAGCCGAGCCGTTTCTCCCTGCTCCAACTACGGTCATAGTCATCAAGAATCGTCGAATTCGTCGTTGGAGAGTGAGGATGACGCGTTTTTGGACCTCCCTGATCTGTTACTCGACTCGAGCCACGGCGGCGCAGGTGGTGAGTTTCAGTTTCGTTACTCGTCAACGCCGTGGCTCGTAGCCGGAGCCGATCAAGTCGACTGTGGCTTCCGGCTGGAAGATCCTTTCCTATGGGATTCTTACTAG 732 0.5492 MDMEEHHQQPLTPQHTATTTPSSSSSSTEELPYTATEAINSSATNEIIHQGKKEKVVKKKVGSDGKHPTYRGVRMRQWGKWVSEIREPKKKSRIWLGTFPTPEMAARAHDVAALAIKGGSAFLNFPELAPLLPRPATTSPKDIQAAAAKAAAISYGTSNEAEPSRAVSPCSNYGHSHQESSNSSLESEDDAFLDLPDLLLDSSHGGAGGEFQFRYSSTPWLVAGADQVDCGFRLEDPFLWDSY* 244
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev05g0859 243 MobiDBLite consensus disorder prediction 10 47 - -
Aev05g0859 243 CDD AP2 70 128 IPR001471 GO:0003700|GO:0006355
Aev05g0859 243 Gene3D AP2/ERF domain 69 127 IPR036955 GO:0003700|GO:0006355
Aev05g0859 243 Pfam AP2 domain 68 118 IPR001471 GO:0003700|GO:0006355
Aev05g0859 243 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF042-RELATED 14 226 - -
Aev05g0859 243 ProSiteProfiles AP2/ERF domain profile. 69 126 IPR001471 GO:0003700|GO:0006355
Aev05g0859 243 SMART rav1_2 69 132 IPR001471 GO:0003700|GO:0006355
Aev05g0859 243 MobiDBLite consensus disorder prediction 1 68 - -
Aev05g0859 243 SUPERFAMILY DNA-binding domain 69 127 IPR016177 GO:0003677
Aev05g0859 243 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF043 14 226 - -
Aev05g0859 243 MobiDBLite consensus disorder prediction 48 68 - -
Aev05g0859 243 PRINTS Ethylene responsive element binding protein signature 92 108 IPR001471 GO:0003700|GO:0006355
Aev05g0859 243 PRINTS Ethylene responsive element binding protein signature 70 81 IPR001471 GO:0003700|GO:0006355
Aev05g0859 243 MobiDBLite consensus disorder prediction 161 187 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev05g0859 Aev-Chr5 6014105 6014836 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev05g0859 58 239 AP2-EREBP Transcription Factor Family AT2G44940 51.196 9.83e-60 189
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Aev05g0859 AP2 2e-13 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev05g0859 - - gmx:100101914 235.728
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev05g0859 05 6014105 6014836 Aev01g0363 01 3061321 3062079 PCT