Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev05g0857 ATGACGCGGCGATGCTCGCATTGCAGCAACAATGGGCACAACTCGAGGACTTGCCCGAACCGTGGGGTGAAGCTTTTCGGGGTCCGATTGACTGATGGGTCGATCCGAAAAAGTGCTAGTATGGGCAATCTCACACACTTTTCCGGGTCGGGTTCTGGGTCCAACCATTCCGCGTCCAACAATCCGGGTTCTCCTGGCAGTGACACACCTGATCACGCCGCCGCCGCTGACGGTTATGCCTCCGAGGACTTTGTTCCTGGGTCGTCTTCTTCTACCTCCCGTGAACGGAAAAAGGGTGTCCCTTGGACTGAGGAGGAACATAGAATGTTTTTACTTGGATTGCAGAAGCTTGGTAAAGGTGATTGGCGTGGAATCGCACGAACTTATGTCACATCAAGGACGCCTACTCAAGTGGCCAGTCATGCTCAAAAATATTTCATTAGGCAAACCAATGTGTCTAGACGCAAAAGACGTTCCAGTCTATTTGATATCATTGCAGATGAGTCAGCTGACACACCAATGACACAACAAGACTTGTTACCACCAAATCAGCTCCTAGCTGAAACGGAAGGTAATAACCCTTTGCCTGCTCCTCCAGCCCTTGATGAAGAGTGTGAATCCATGGATTCCACTAACTTAAATGATGGGGAATCTGCGTCATTAAATCCGGATAACTCGCGATCATCATACGCAATGCTATATCCGACATACTATCCTTTCTTCCCTTTACCTCCGCACGGTTGGTCAGGATACAATCAAGAGCCTGTTAAGGAGACTCATGAAGTGCTGAAACCAACTGCAGTGCATTCTAAATCCCCAATCAATGTCGATGAACTGGTTGGCATGTCAAAACTGAGTTTAGGAGACACCATTGGCGACTCCGGCCCCTCCACTCTGTCGCTGAAACTCCTACCTTCTAGACAGTCAGCTTTTCATGCAACTCCAGCATGCAGTAGTTCAAACATGAACGGAAGTGCGATCCATGCAGTTTAA 993 0.4874 MTRRCSHCSNNGHNSRTCPNRGVKLFGVRLTDGSIRKSASMGNLTHFSGSGSGSNHSASNNPGSPGSDTPDHAAAADGYASEDFVPGSSSSTSRERKKGVPWTEEEHRMFLLGLQKLGKGDWRGIARTYVTSRTPTQVASHAQKYFIRQTNVSRRKRRSSLFDIIADESADTPMTQQDLLPPNQLLAETEGNNPLPAPPALDEECESMDSTNLNDGESASLNPDNSRSSYAMLYPTYYPFFPLPPHGWSGYNQEPVKETHEVLKPTAVHSKSPINVDELVGMSKLSLGDTIGDSGPSTLSLKLLPSRQSAFHATPACSSSNMNGSAIHAV* 331
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev05g0857 330 MobiDBLite consensus disorder prediction 186 225 - -
Aev05g0857 330 ProSiteProfiles Myb-like domain profile. 94 146 IPR001005 -
Aev05g0857 330 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 97 149 IPR006447 GO:0003677
Aev05g0857 330 SMART sant 98 148 IPR001005 -
Aev05g0857 330 MobiDBLite consensus disorder prediction 211 225 - -
Aev05g0857 330 MobiDBLite consensus disorder prediction 1 18 - -
Aev05g0857 330 PANTHER TRANSCRIPTION FACTOR KUA1 244 320 - -
Aev05g0857 330 PANTHER BNAC01G21010D PROTEIN 244 320 - -
Aev05g0857 330 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 94 150 IPR017930 -
Aev05g0857 330 MobiDBLite consensus disorder prediction 40 67 - -
Aev05g0857 330 Pfam Myb-like DNA-binding domain 101 146 IPR001005 -
Aev05g0857 330 Gene3D - 100 152 - -
Aev05g0857 330 PANTHER TRANSCRIPTION FACTOR KUA1 1 222 - -
Aev05g0857 330 MobiDBLite consensus disorder prediction 1 21 - -
Aev05g0857 330 PANTHER BNAC01G21010D PROTEIN 1 222 - -
Aev05g0857 330 CDD SANT 101 146 IPR001005 -
Aev05g0857 330 MobiDBLite consensus disorder prediction 40 102 - -
Aev05g0857 330 ProSiteProfiles Zinc finger CCHC-type profile. 3 20 IPR001878 GO:0003676|GO:0008270
Aev05g0857 330 SUPERFAMILY Homeodomain-like 96 151 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev05g0857 Aev-Chr5 5999988 6002377 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Aev05g0857 Myb_DNA-binding 7.8e-11 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev05g0857 - - ccaj:109807943 531.561