Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev05g0852 ATGATGACGACTGAAAAGGAAGATTTGGGCTTGAGTCTGAGCTTGAGCTTCCCTAACAGTACTAACAACCCCCCACCAAACTCCAATCACCTCAATAATCTACTTTCATCTTCCAACTATTCCTCTTCTCCATCTCCTTACAACGCTCATCAGAAACCCTCTTGGAACGAACCTTTCACTTCTTCAGATCGAGATTCAGAAACATGCAGAGGCGGCGAAGGTCGATCGTTCCTCCGGGGAATCGACGTGAACCGGTTACCTTCGGGCGTGGATTGCGAAGAGGAGGCAGGTGTTTCATCTCCAAACAGCACAGTGTCGAGCGTGAGCGGGAAAAGGAGCGAGAGGGAACCCAATGGGGAAGAACTCGACATGGACAGAGCATGTTCCAGAGGGATCAGCGACGAAGAAGACGGAGAAACTTCCAGGAAGAAGCTCAGGCTCTCAAAAGACCAGTCAGCTATTCTTGAAGAGAGCTTCAAAGAACACAACACCCTCAACCCCAAGCAAAAGTTGGCACTGGCGAAGCAGCTTGGCCTTCGGGCAAGACAAGTTGAGGTCTGGTTCCAGAACAGAAGAGCAAGGACAAAGCTGAAGCAAACAGAAGTAGACTGTGAGTTCTTGAAGAGGTGCTGTGAGAATCTGACGGAGGAGAATAGGAGGCTGCAGAAGGAAGTTCAGGAGCTTAGAGCACTGAAGCTTTCCCCGCAGTTCTACATGCAGATGACCCCGCCCACCACCCTCACCATGTGCCCTTCTTGCGAGCGTGTCGCTGTTCCTCCATCCGCCGTCGATGCTGCCACGCGCCATCATCACATGGCCACAGCTCACCCTCGGCCCATTCCAATAGGCCCATGGGCCGCCACTGCTGCTGCTCCTATCCCTCACAGGCCCTTCGATGCCCTCCGTCCTAGGTCATGA 918 0.5294 MMTTEKEDLGLSLSLSFPNSTNNPPPNSNHLNNLLSSSNYSSSPSPYNAHQKPSWNEPFTSSDRDSETCRGGEGRSFLRGIDVNRLPSGVDCEEEAGVSSPNSTVSSVSGKRSEREPNGEELDMDRACSRGISDEEDGETSRKKLRLSKDQSAILEESFKEHNTLNPKQKLALAKQLGLRARQVEVWFQNRRARTKLKQTEVDCEFLKRCCENLTEENRRLQKEVQELRALKLSPQFYMQMTPPTTLTMCPSCERVAVPPSAVDAATRHHHMATAHPRPIPIGPWAATAAAPIPHRPFDALRPRS* 306
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev05g0852 305 Pfam Homeobox associated leucine zipper 198 232 IPR003106 GO:0006355|GO:0043565
Aev05g0852 305 PRINTS Lambda-repressor HTH signature 169 178 IPR000047 GO:0003677
Aev05g0852 305 PRINTS Lambda-repressor HTH signature 178 194 IPR000047 GO:0003677
Aev05g0852 305 Coils Coil 197 234 - -
Aev05g0852 305 MobiDBLite consensus disorder prediction 92 145 - -
Aev05g0852 305 CDD homeodomain 142 199 IPR001356 GO:0003677
Aev05g0852 305 PANTHER HOMEOBOX ASSOCIATED LEUCINE ZIPPER PROTEIN 3 293 - -
Aev05g0852 305 MobiDBLite consensus disorder prediction 1 75 - -
Aev05g0852 305 MobiDBLite consensus disorder prediction 97 112 - -
Aev05g0852 305 MobiDBLite consensus disorder prediction 113 145 - -
Aev05g0852 305 PANTHER - 3 293 - -
Aev05g0852 305 ProSitePatterns 'Homeobox' domain signature. 173 196 IPR017970 GO:0000981|GO:0006355
Aev05g0852 305 Pfam HD-ZIP protein N terminus 4 116 IPR006712 GO:0005634
Aev05g0852 305 SMART HOX_1 140 202 IPR001356 GO:0003677
Aev05g0852 305 SMART halz 198 241 IPR003106 GO:0006355|GO:0043565
Aev05g0852 305 MobiDBLite consensus disorder prediction 9 62 - -
Aev05g0852 305 SUPERFAMILY Homeodomain-like 130 199 IPR009057 -
Aev05g0852 305 ProSiteProfiles 'Homeobox' domain profile. 138 198 IPR001356 GO:0003677
Aev05g0852 305 Pfam Homeodomain 142 196 IPR001356 GO:0003677
Aev05g0852 305 Gene3D - 146 196 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev05g0852 Aev-Chr5 5965791 5967512 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev05g0852 2 305 Homeobox Transcription Factor Family AT4G16780 65.033 7.32e-115 331
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Aev05g0852 HD-ZIP_N 1.3e-30 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev05g0852 K09338 - zju:107430326 435.261