Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev05g0850 ATGCGGTTGTTTTCGCTGAGTTCAAGTTCAAGGTCGCAAAGGGAAGAGAAGAAGAACCGTGCTACCGTCTATCTCAATGTTTATGATCTTACTCCCATAAACAATTACCTTTACTTTTTTGGCCTTGGGGTCTTCCATTCCGGTATTGAAGTACATGGTATGGAGTATGGCTTTGGAGCACATGAGTACTCTTCAAGTGGTGTGTTTGAGGTAGAACCAAGAAGTTGCCCTGGCTTCATCTTTAGACGATCAGTCTTGTTGGGGAGCACTGATATGTCAAAGTCAGAATTTCGTTCTTTCTTGGTGCGCCTCACTGCAAAATATCATGGAGACACTTACCATCTTATTGCCAAGAATTGCAACCATTTTACTGATGAAGTTTCCCAACAGCTAACTGGAAAGCCTATCCCTGGATGGGTAAATCGGCTGGCTCGTGTCGGTTCTTTCTGCAATTGCCTTCTGCCACAAAGGCTTCAGGCTGCTGCAGTTAGACATCTCCCCGAACATCTAGCATATTCTGATGATGAAGGATCCAAATCGGATGGCCTTTCTGCGTCAATTGAGAGCGAAGAGGAGGATTCCAACCACCACCTGCTAACTGCACCAAATGGCGATGTTGCCTTTCTAAAGGAAAAACCAGTTAGGCTGCTGGCAAGAGAGGCCACATATGCAGGTTGCCATGCACCTAAATGCAGTGATGTTGGCCCTGATATCCAATTCCCATTCCATCTAAAAGGCCATAATCCCCTCTATCACACTCTCCCTGCCTTTGAATTGTCCTGCAAAGCAAACTTGACCACTATCCACTTTCCAAATTTTGGTGATTTGGTTGTTAAGTCCATTTCCTATGACACCAAAAAGATTGCTCTTCTTGACCCCAAAAACTGTGTCCACGCTGTCTTTCTCAACCTCAACCTCTCCCTTACACCTTTTCACTATTACCATGTTGTCAAAAACTATACATACCTCAATTGCTCCAAAACACTTTCACATGATCCTTTCATTGAGGTTCCTTGTTTGAGTGGCTCCAATTCTCATGTTTATACGGTTAACCCTGAAATGAATGTTCCTGGTTCATGTAAGGGATTCAGAACTGTGGCAATTCCTTTTAGATACAGCCCCTATCTCTCAGACAACAGTTTCGGTCTTGAATTTACCTGGGACTTGCCTCAATCTCAACAAACCAGAGCAACAAATCAGACAATAGAATCACACACAACACGTTATACAGTTATAGGCATCAGTATCTGCTTGTTGTTGGTGGCAATTGCAATTATTAGCGTAAAGGTTAATGGATCCACCAGGAATTGCCCTCAGAAAGAAGGTCGGTTATTGCAGAGCTCGCCGAATGTGTAA 1356 0.4366 MRLFSLSSSSRSQREEKKNRATVYLNVYDLTPINNYLYFFGLGVFHSGIEVHGMEYGFGAHEYSSSGVFEVEPRSCPGFIFRRSVLLGSTDMSKSEFRSFLVRLTAKYHGDTYHLIAKNCNHFTDEVSQQLTGKPIPGWVNRLARVGSFCNCLLPQRLQAAAVRHLPEHLAYSDDEGSKSDGLSASIESEEEDSNHHLLTAPNGDVAFLKEKPVRLLAREATYAGCHAPKCSDVGPDIQFPFHLKGHNPLYHTLPAFELSCKANLTTIHFPNFGDLVVKSISYDTKKIALLDPKNCVHAVFLNLNLSLTPFHYYHVVKNYTYLNCSKTLSHDPFIEVPCLSGSNSHVYTVNPEMNVPGSCKGFRTVAIPFRYSPYLSDNSFGLEFTWDLPQSQQTRATNQTIESHTTRYTVIGISICLLLVAIAIISVKVNGSTRNCPQKEGRLLQSSPNV* 452
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev05g0850 451 PANTHER DESUMOYLATING ISOPEPTIDASE 11 216 IPR008580 GO:0008233
Aev05g0850 451 Gene3D PPPDE domains 15 167 IPR042266 -
Aev05g0850 451 Pfam Wall-associated receptor kinase galacturonan-binding 226 291 IPR025287 GO:0030247
Aev05g0850 451 ProSiteProfiles PPPDE domain profile. 21 158 IPR008580 GO:0008233
Aev05g0850 451 Pfam PPPDE putative peptidase domain 22 156 IPR008580 GO:0008233
Aev05g0850 451 PANTHER THIOL PEPTIDASE FAMILY PROTEIN, PUTATIVE-RELATED 11 216 - -
Aev05g0850 451 SMART DUF862_2a 21 159 IPR008580 GO:0008233
Aev05g0850 451 MobiDBLite consensus disorder prediction 173 195 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev05g0850 Aev-Chr5 5952150 5956764 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev05g0850 226 399 C3H Transcription Factor Family AT2G25410 32.065 4.83e-17 80.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev05g0850 K22763 - gmx:100797619 363.999