Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev05g0848 ATGTATGCACAGAGTACTTACGAGTCCGATTTGGCCGTTCTGGACTCCATTCGCCGCTACTTACTAGGCGAGTCCGACCCGAATAAGTTCGGAGCCCCGAACTCTGCTCCCACCAACGTCCCAATTTTCTGTCGCAGCTCCAGCTTCAGCAGCTTGTACCCATGTTTAACTGACAATTGGGGCGATTTGCCACTTAAAGAAAACGATTCAGAGGACATGGTTCTCTACGGCGTCCTCCGCGACGCCGTTAGTGTTGGCTGGGTCCCCTCTCTAGAAGCGGGCTCACCCGACAGCTTCTCCTCGGGTGAAGTAACTGTCAAACCGGAGCCCGAACTATTCCCGGCGGTTCCGTGTCTCCCGGAGCCAGTTTCTGCTGCTGCTCCGGCGATTAAGCAAGAGGTGGCCGCCGTTCCGGCGGTTGCGGCTCCGGCTCCGGCTCCGACGAAGGGGAAGCACTACCGCGGTGTAAGGCAAAGGCCGTGGGGGAAGTTCGCGGCGGAGATCCGGGACCCGGCGAAAAACGGGGCTCGTGTATGGCTCGGAACGTTCGAAACCGCGGAGGATGCTGCTTTGGCTTACGACCGTGCCGCGTACAGAATGCGCGGGTCGCGGGCGCTGTTGAACTTCCCTCTCCGGGTCAACTCGGGTGAACCCGACCCGGTGAGGGTAACATCAAAAAGGTCTTCGCCTGAGCCTTCATCTTCGTCGGAGAGTGGATCGCCGGCGAAGAGGAAGAGGAAAGTAGCGGTGGGGCCAACAGTTCCGGTGGTGACCGGACAAGTGGAATTGAAGACAGGGCAAGTGGAGAGTCAAGTAGCACAATGCACACGTGGCGAGCAGTTATTGGTCGGCTAA 855 0.5871 MYAQSTYESDLAVLDSIRRYLLGESDPNKFGAPNSAPTNVPIFCRSSSFSSLYPCLTDNWGDLPLKENDSEDMVLYGVLRDAVSVGWVPSLEAGSPDSFSSGEVTVKPEPELFPAVPCLPEPVSAAAPAIKQEVAAVPAVAAPAPAPTKGKHYRGVRQRPWGKFAAEIRDPAKNGARVWLGTFETAEDAALAYDRAAYRMRGSRALLNFPLRVNSGEPDPVRVTSKRSSPEPSSSSESGSPAKRKRKVAVGPTVPVVTGQVELKTGQVESQVAQCTRGEQLLVG* 285
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev05g0848 284 PRINTS Ethylene responsive element binding protein signature 176 192 IPR001471 GO:0003700|GO:0006355
Aev05g0848 284 PRINTS Ethylene responsive element binding protein signature 153 164 IPR001471 GO:0003700|GO:0006355
Aev05g0848 284 Pfam AP2 domain 152 202 IPR001471 GO:0003700|GO:0006355
Aev05g0848 284 PANTHER DNA-BINDING DOMAIN 30 255 IPR044808 GO:0003700|GO:0009873
Aev05g0848 284 Gene3D AP2/ERF domain 151 213 IPR036955 GO:0003700|GO:0006355
Aev05g0848 284 ProSiteProfiles AP2/ERF domain profile. 152 210 IPR001471 GO:0003700|GO:0006355
Aev05g0848 284 MobiDBLite consensus disorder prediction 215 254 - -
Aev05g0848 284 CDD AP2 151 210 IPR001471 GO:0003700|GO:0006355
Aev05g0848 284 SMART rav1_2 152 216 IPR001471 GO:0003700|GO:0006355
Aev05g0848 284 SUPERFAMILY DNA-binding domain 152 212 IPR016177 GO:0003677
Aev05g0848 284 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 1-RELATED 30 255 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev05g0848 Aev-Chr5 5932858 5933712 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev05g0848 1 283 AP2-EREBP Transcription Factor Family AT4G17500 56.014 8.36e-88 261
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Aev05g0848 AP2 1.2e-14 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev05g0848 K09286 - gmx:100819649 320.857