Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev05g0836 ATGGGCAAGCAAGGACCTTGCTATCACTGTGGAGTTACAAGCACACCTCTTTGGCGCAATGGGCCACCGGAGAAGCCAGTATTATGCAATGCATGCGGGTCTCGATGGAGGACAAAGGGAACACTTGCAAATTATACCCCTCTACATGCACGGCCAGATGATTATGAGGATCAAAAGGCTTCCAGAGTAAAGAGCATATCGATAAATAAGAACAAAGAAATGAAAATGCTCAAACGAAAGCAGAACTATGATAATGTAATATATGGAGGTTCTGCCCCTGATTACAACCAGGCATTCCGAAAGGCTGTGGATGAAGATACAAGCAACCGATCGAGTTCAGGATCAGCTGTTTCTAACTCAGAGAGCTACGCTCAATTTGGTGGCATTGATGCTAGTGATTTGACAGGTCCTGCTCAGTCAGTGGTCTGGGATACAATGGTGCCGTCGAAAAAGAGGACGTGTGTCGGTCGTCCAAAGCCTTCTTCTGTCGAGAAGCTGACAAAAGATTTATGCACTATTCTTCACGAGCAACAGTCTTATTTTTCTGCATCTTCTGAAGAGGATCTTCTTTTTGAGAGCGAAACTCCTATGGTCTCTGTGGAGATAGGACATGGAAGCGTTCTTATTAGGCATCCTAGCTATATAGCTCATGAAGAAGAGTCCGAGGCCAGCTCTCTTTCAGTTGATAATAAGCAATGCCCAGTGAGTGATACATATTCGTATTCTGGTGCCAATCTGATGCATAATGATTCCGGCGGTATGAACTTTTCGTCTCTTGGAGTTGAAAAGGTGAGGAACTATGCTGGCGAAGGAATGCTGCAGGAGCAACTTAAGAGCGACAAGTCTCAACTTGAGAAAGTACAGATCCTTGGAAATCATGATTCGCCACTGTGCTCAATAGATTTAAATGATGTAGTAAACTATGAGGAGTTTGTGAGAAACCTGACAAATGAAGACCAGCAACAATTACTGAAGTTTCTTCCTGTGGTTGACACTGCTAAACTTCCTGATAGCCTCAAAGTCATGTTCAATAGCTCTCAATTCAAGGAGAACTTAAACTATTTTCAGCAGCTTCTCGGGGAAGGTGTCTTTGATATCTCTCTTTTAGGGGCAAAACTTGAAGATTGCAAGACTTTGAAAAGGCTTGCACTATCCAATCTTTCAAAGTCAAAATTGCTGGAACACTATAATTTTCTAAAGAGATGTAAAAACAAAGCCGGAAAATCTGTTACTCTGGGATCAACCGGTAAAACATCATCGAATTTGGCAAACGTCAAGAGATTGCGTGACGGCCGAAATCAAAGTTCTCCAGAAATGAAGACAATAATGAGGAGCCCCAAAAGAATAACCATAAAAGCTGGCTGCGAGAGCAAAGAAGTCACAGAAGACGGTTGTTGCTACAGTCCGAAAAGCCTATTCGCCTTGCCACCTGATGCTAGCTCACTCCTGCTTGATTCATTAAACTTTGCAGGGGAGAGTTGTGATCAGGATCTGCTGGTAGAGGTTCCATCTAACAGTTCATTTCCACAGGCAGAGCTCTTGCACCCAACTTCAAGCTTTCTTGGTGCTCAAGCCAGCACTAGTAGTAGCTCAGTCTACTCACATCATCTTGTCCATAATTGA 1623 0.4338 MGKQGPCYHCGVTSTPLWRNGPPEKPVLCNACGSRWRTKGTLANYTPLHARPDDYEDQKASRVKSISINKNKEMKMLKRKQNYDNVIYGGSAPDYNQAFRKAVDEDTSNRSSSGSAVSNSESYAQFGGIDASDLTGPAQSVVWDTMVPSKKRTCVGRPKPSSVEKLTKDLCTILHEQQSYFSASSEEDLLFESETPMVSVEIGHGSVLIRHPSYIAHEEESEASSLSVDNKQCPVSDTYSYSGANLMHNDSGGMNFSSLGVEKVRNYAGEGMLQEQLKSDKSQLEKVQILGNHDSPLCSIDLNDVVNYEEFVRNLTNEDQQQLLKFLPVVDTAKLPDSLKVMFNSSQFKENLNYFQQLLGEGVFDISLLGAKLEDCKTLKRLALSNLSKSKLLEHYNFLKRCKNKAGKSVTLGSTGKTSSNLANVKRLRDGRNQSSPEMKTIMRSPKRITIKAGCESKEVTEDGCCYSPKSLFALPPDASSLLLDSLNFAGESCDQDLLVEVPSNSSFPQAELLHPTSSFLGAQASTSSSSVYSHHLVHN* 541
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev05g0836 540 Gene3D - 284 387 IPR038108 -
Aev05g0836 540 Pfam Asx homology domain 281 365 IPR028020 -
Aev05g0836 540 CDD ZnF_GATA 6 54 IPR000679 GO:0006355|GO:0043565
Aev05g0836 540 SMART GATA_3 1 53 IPR000679 GO:0006355|GO:0043565
Aev05g0836 540 Pfam GATA zinc finger 7 41 IPR000679 GO:0006355|GO:0043565
Aev05g0836 540 ProSiteProfiles GATA-type zinc finger domain profile. 7 40 IPR000679 GO:0006355|GO:0043565
Aev05g0836 540 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 5 45 - -
Aev05g0836 540 ProSitePatterns GATA-type zinc finger domain. 7 32 IPR000679 GO:0006355|GO:0043565
Aev05g0836 540 PANTHER GATA TRANSCRIPTION FACTOR-LIKE PROTEIN 1 535 - -
Aev05g0836 540 PANTHER OSJNBB0038F03.10 PROTEIN 1 535 IPR044589 -
Aev05g0836 540 ProSiteProfiles DEUBAD (DEUBiquitinase ADaptor) domain profile. 293 405 IPR044867 -
Aev05g0836 540 Gene3D - 3 83 IPR013088 GO:0006355|GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev05g0836 Aev-Chr5 5857566 5862259 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev05g0836 1 515 C2C2-Gata Transcription Factor Family AT4G17570 53.788 7.11e-167 481
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-GATA Aev05g0836 ASXH 1.3e-09 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev05g0836 - - gmx:100803914 798.119
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev05g0836 05 5857566 5862259 Aev01g0385 01 3265473 3270568 PCT