Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev05g0834 ATGGAACTTAATTTGAAGCACCAACTTGGCCTTGTTTGTGCCATTCTGTTTTTACCAGTCATGTGTAGCTCTCAGGACTCTTTTACGTTCTCTAGAGCAACCTATTACGGTAGCCCCGATTGCTATGGGAATCCAAGGGGAGCTTGTGGCTTTGGCGAATATGGAAAGACGGTAAACGATGGCAGTGTTGCCGGCGTGTCTTGGCTATGGCGGAATGGTTCTGGCTGTGGTGCATGCTATCAAGTTAGGTGCAAAATACCACAATATTGTGATGACTATGGAGCTTACGTAGTGGTGACAGATTATGGAGAGGGAGACAGGACAGACTTTATCATGAGCCCACGTGCTTATTCAAAATTGGGAAGAAATGAAGATGCATCATTAGAGCTTTTCAAATATGGTGTTGTGGATATTGAATACAAAAGGGTACCTTGCAGATACAACGGCTATAACCTTCTAGTTAAGGTCCATGAACGCAGCAGAAACCCTCACTACTTGGCCATTATCATTCTCTATGTTGGTGGAACCTATGATGTCTCTGCAGTTCAGTTGTGGCAGGAAGACTGCCAAGAGTGGAGGCCAATGCGAAGGGCGTTTGGAGTAGTGTTTGATGCTGAAAACCCGCCAAGGGGTGACATCAGGTTGAGGTTTCAAATGAGTGGCAGGGCAGGGCTTTATTGGGTGGAGTCCAAGAATGTTATCCCCAGTGATTGGAAAGCCGAAGCTTACTATGATACAGAAATTCAGCTTGATTGA 756 0.455 MELNLKHQLGLVCAILFLPVMCSSQDSFTFSRATYYGSPDCYGNPRGACGFGEYGKTVNDGSVAGVSWLWRNGSGCGACYQVRCKIPQYCDDYGAYVVVTDYGEGDRTDFIMSPRAYSKLGRNEDASLELFKYGVVDIEYKRVPCRYNGYNLLVKVHERSRNPHYLAIIILYVGGTYDVSAVQLWQEDCQEWRPMRRAFGVVFDAENPPRGDIRLRFQMSGRAGLYWVESKNVIPSDWKAEAYYDTEIQLD* 252
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev05g0834 251 PANTHER EXPANSIN-B3 4 250 - -
Aev05g0834 251 ProSiteProfiles Expansin, family-45 endoglucanase-like domain profile. 46 150 IPR007112 -
Aev05g0834 251 Pfam Expansin C-terminal domain 154 235 IPR007117 -
Aev05g0834 251 ProSiteProfiles Expansin, Cellulose-binding-like domain profile. 164 246 IPR007117 -
Aev05g0834 251 PRINTS Expansin/Lol pI family signature 27 42 IPR007118 GO:0005576
Aev05g0834 251 PRINTS Expansin/Lol pI family signature 133 149 IPR007118 GO:0005576
Aev05g0834 251 PRINTS Expansin/Lol pI family signature 66 84 IPR007118 GO:0005576
Aev05g0834 251 PRINTS Expansin/Lol pI family signature 232 246 IPR007118 GO:0005576
Aev05g0834 251 PRINTS Expansin/Lol pI family signature 192 206 IPR007118 GO:0005576
Aev05g0834 251 Pfam Lytic transglycolase 63 140 IPR009009 -
Aev05g0834 251 Gene3D - 19 145 IPR036908 -
Aev05g0834 251 SUPERFAMILY PHL pollen allergen 152 245 IPR036749 -
Aev05g0834 251 Gene3D - 146 247 IPR036749 -
Aev05g0834 251 PANTHER EXPANSIN-B1-LIKE PROTEIN 4 250 - -
Aev05g0834 251 SUPERFAMILY Barwin-like endoglucanases 14 149 IPR036908 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev05g0834 Aev-Chr5 5849939 5851381 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev05g0834 5 250 Expansin Gene Family AT4G17030 58.964 2.34e-111 318
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev05g0834 - - gmx:100802855 457.603
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev05g0834 05 5849939 5851381 Aev01g0395 01 3331069 3334065 PCT