Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev05g0828 ATGAAACCGCAGAACCTCAAAGCTTTGAATTTACTCTCCCAACAAGTTTCCTATCATCCTCACATCTCCATGGAAGAGATTCCCAATTTGGGCAATTTCAGTGTGAATAAAGGGGCACAAATGACAATCTTTTATGGTGGGGAAATTATTGTGTTTGATGATATTGTAGCTGACAAAGCCAAAGAGATCATGTCCATTATTGCAAGCAAAGGGAGTGGTCACAGCAACTATGGTTACACAATCCCTAATCAGACCCAAGTACCTTCATTTCCTTCTCCTAATATGGTCACAAGTTCTGCTACTCCCACCACTCCTCAATTCCCTTTTCTTCTTCCTAACAATTCTGCTGAAGAGCACCCTCAACCACCATCCAGATCTGTTGTCTGTGATCTTCCACTTGCTAGGAAAGCTTCACTGCATCGGTTCCTGGAGAAGAGAAAGGATAGAATTGCTGCCAGAGCACCATATCAGACAAGCAGTCCCATGTCATGGCTCGCCATGGTACCTGAGTCACCACAAGCAAATTCTGAGACTAGCTCAAGTGTTGTGTAA 552 0.4366 MKPQNLKALNLLSQQVSYHPHISMEEIPNLGNFSVNKGAQMTIFYGGEIIVFDDIVADKAKEIMSIIASKGSGHSNYGYTIPNQTQVPSFPSPNMVTSSATPTTPQFPFLLPNNSAEEHPQPPSRSVVCDLPLARKASLHRFLEKRKDRIAARAPYQTSSPMSWLAMVPESPQANSETSSSVV* 184
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev05g0828 183 Pfam Jas motif 132 157 IPR018467 -
Aev05g0828 183 PANTHER PROTEIN TIFY 10A-LIKE 4 173 - -
Aev05g0828 183 SMART tify_2 34 69 IPR010399 -
Aev05g0828 183 Pfam tify domain 38 66 IPR010399 -
Aev05g0828 183 ProSiteProfiles Tify domain profile. 34 69 IPR010399 -
Aev05g0828 183 PANTHER PROTEIN TIFY 4A-RELATED-RELATED 4 173 IPR040390 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev05g0828 Aev-Chr5 5819250 5820119 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev05g0828 39 170 Tify Gene Family AT1G19180 40.278 3.35e-24 93.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Tify Aev05g0828 tify 7.5e-14 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev05g0828 K13464 - gmx:100306332 180.259