Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev05g0822 ATGCATTGCAATACTCCCATTGCGTGCAGAACTCGCTCCAAGGAATCCCGTCGGAGCAAAACCGAACGTTGTGAGGTTGTCGTCGGCATAAGTTCCGACGACGGCGATGACGATGTTGTCGCCGTTGATGAAGTTCCCGCGAAACTCCAACAGCAGAGGAGTTGCGATGCAAGTGGGTTTGGGACCCAGCGTTTCTGTTCTGACGCAATGCAGAGTGATGACGTGGCCGTTTCAGGAGAAGAGGTGATTATTGTGGGTGAAGGGGAAGAAGGTTCTGAAGATGGCGGTGATGACGTGGACGTTAAGAGCAAGGGCGAGAACGGAGAGGAAATGGAGCTTGGATCGAAGAGGAAGAGAAAATGCGGACTTGACCTTCTCGTTGACTGTAATGCGAGAGAAAGCTATGCATGTACGGAGAAACTGCCAAAGAAAAGTGTGAAATCCACGGGAAAAATTTACAAGAAGAAAAGGGCTGTTGATGTGGCCAAGATTCTGAAGGATTCCGTCTTCAGAAATTGTGAGGTTCCTCTGGAGGATATAGGTGCTGATGCTGATGCTGATACGAGTTCAAATGTTGAGTTGCCGTCAAAATTCTCTTTCTCGAAGGAAAAGTCAACGCCGCCTCAGAAATCAAGTGAAGATGATGGGTTGGAAGAAATTTGGGATGAGATGGAGCATGGCCTTGAGGCTACACCACAAAACACTGGTTCTGATTCTCTGCCTAGTTCCCTTGAAGAGGGAAGAGTTTGCAACGAGGTTAAGAGCAGAGGTGGCTCTTCTCGGAAAGGGTCTGAATTTGCAAGGAAGAAACTTATTGATGCCCATGATCAAATGGCTTTCCGCGAGTTCAGAGATATTCTTCTTCAGGATTCAGTCCATGATGATGATAATAATAATGAGGGTGAAGGGTCTCCGGATGTAATTGTTAAAGGGAGAAATTCTTGTGTGGATAATATGCCCTTGAAGTTCAATTTTAGACCTCAGGAGGAACCGGCAGCCGAGAAATCGGAGTCTGAGAAGGAGACAGATGCGCTTTTCGCAGAGATGGAGTATAGTCTCTATGTTATCCAGCAAGAGAAAGCTGATCTTGAAGCTCAGGTTGCTAAAAATAGGGAATGTGATGATAAGTATCCCATTGATGATCCTAAGACGCCTGCTCTTTATCGCTGTCGTGGAGGGGTGCATGAACTCGTTCGCGACTGGGAATTTGGAGACTATTGTAGATATTGCGGGCACGTCGCGATGGATATCAGGAGTTGGACACCTCCCTTTCTTGAAAATCCATTTGGAAGATATGACAGGAATTTTTATCCTGAGGACCGTGTGAATCACTCTGTCTTTGATGAGCTACGGGACCAGAATTCTGGATATGATAGTTATATCCACTGTGATCGCAAAGGGACAGTGTGGGATATAGTTCCTGGAGTGAGAGAAACTATGTATCCTCATCAGTGTGAAGCCTTTGAATTTCTCTGGAAAAACTTAGCCGGTGGAATCGTTCTTGATAAGTTGAAAGGAGAAAATGGTTTACCCAATGGAAGTGGCTGCATCATATCTCATGCTCCTGGCACTGGGAAAACCCGGCTCACTATTGGAACCATACTGCAAGATAGTCTTCCTGGGTTGAGGCAAACGATAGTGATATTGAAGCCAACACAGTTGCAGAAGCAACTCCTCTACGATATCCAGAGAGAAAGGGAAAAACTAGACAAGGGAAACCAGGGTGCTAAGAATATTCTGAAAATAGAGTATGAGGAGTCTTTAACTGCCGTGCACCCTTCTCTCTTTCAGCTATATGAGGAAAGCAAGAACAAGTACGAAAGGTTAAGATTGAATCCTGAGGAAAGTGCCAAAACGAAGTTCTTAATGGAACTCATCATGATTAGTGAGATTTTCGATGAAAAAGTCTTGGTCTTTAGTCAATTTATCGAGCCCCTGAAGCTTCTTACAAGCCAGCTTAAGCATATTTTTGGTTGGAGTGAAGGAAAAGAGGTGCTTCAAATACATGGAAAACTCGAAGCGAAGCCGCGCCAGACATCAATCAAAGCATTCAACGATCCCAAGAGCCAAGTGAGGGTAATGCTAGCATCAACCAAGGCTTGTTATGAGGGGATAAGTTTGGTTGGTGCCTCAAGGGTTGTTCTGCTTGATGTTGTGTGGAATCCTTCAGTGGAGAGACAAGCTATAAGCCGTGCTTATAGGCTCGGGCAGGAGAAGTTTGTTCACACGTACCATCTGATCACTGCAGGGACAAGGGACGAGGAAAAATGCAGTCGACAAGCCGAGAAAGACGAGCTATCTGAGTTGGTGTTCTTTGATTCTGATGCAGCTAAGCATCGTGAAGTTCATTCATCTGCAGAATTGGAAGATAGAGTCCTTGAACATATGGTTCAGCAACAAAACCTTAGGCATATGTTTGAGAAAGTGGCTGTTAAGAAACAAAATCTACTCTGA 2454 0.4515 MHCNTPIACRTRSKESRRSKTERCEVVVGISSDDGDDDVVAVDEVPAKLQQQRSCDASGFGTQRFCSDAMQSDDVAVSGEEVIIVGEGEEGSEDGGDDVDVKSKGENGEEMELGSKRKRKCGLDLLVDCNARESYACTEKLPKKSVKSTGKIYKKKRAVDVAKILKDSVFRNCEVPLEDIGADADADTSSNVELPSKFSFSKEKSTPPQKSSEDDGLEEIWDEMEHGLEATPQNTGSDSLPSSLEEGRVCNEVKSRGGSSRKGSEFARKKLIDAHDQMAFREFRDILLQDSVHDDDNNNEGEGSPDVIVKGRNSCVDNMPLKFNFRPQEEPAAEKSESEKETDALFAEMEYSLYVIQQEKADLEAQVAKNRECDDKYPIDDPKTPALYRCRGGVHELVRDWEFGDYCRYCGHVAMDIRSWTPPFLENPFGRYDRNFYPEDRVNHSVFDELRDQNSGYDSYIHCDRKGTVWDIVPGVRETMYPHQCEAFEFLWKNLAGGIVLDKLKGENGLPNGSGCIISHAPGTGKTRLTIGTILQDSLPGLRQTIVILKPTQLQKQLLYDIQREREKLDKGNQGAKNILKIEYEESLTAVHPSLFQLYEESKNKYERLRLNPEESAKTKFLMELIMISEIFDEKVLVFSQFIEPLKLLTSQLKHIFGWSEGKEVLQIHGKLEAKPRQTSIKAFNDPKSQVRVMLASTKACYEGISLVGASRVVLLDVVWNPSVERQAISRAYRLGQEKFVHTYHLITAGTRDEEKCSRQAEKDELSELVFFDSDAAKHREVHSSAELEDRVLEHMVQQQNLRHMFEKVAVKKQNLL* 818
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev05g0822 817 MobiDBLite consensus disorder prediction 97 111 - -
Aev05g0822 817 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 621 817 IPR001650 -
Aev05g0822 817 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 536 773 IPR027417 -
Aev05g0822 817 MobiDBLite consensus disorder prediction 1 20 - -
Aev05g0822 817 PANTHER SNF2 DOMAIN-CONTAINING PROTEIN CLASSY 4 532 814 - -
Aev05g0822 817 MobiDBLite consensus disorder prediction 230 244 - -
Aev05g0822 817 CDD SF2_C_SNF 616 747 - -
Aev05g0822 817 SMART helicmild6 647 736 IPR001650 -
Aev05g0822 817 Gene3D - 457 569 IPR038718 -
Aev05g0822 817 PANTHER SNF2 DOMAIN-CONTAINING PROTEIN CLASSY 2-RELATED 282 531 IPR044567 GO:0080188
Aev05g0822 817 PANTHER SNF2 DOMAIN-CONTAINING PROTEIN CLASSY 2-RELATED 20 250 IPR044567 GO:0080188
Aev05g0822 817 PANTHER SNF2 DOMAIN-CONTAINING PROTEIN CLASSY 2-RELATED 532 814 IPR044567 GO:0080188
Aev05g0822 817 Gene3D - 594 813 IPR027417 -
Aev05g0822 817 MobiDBLite consensus disorder prediction 87 111 - -
Aev05g0822 817 MobiDBLite consensus disorder prediction 185 264 - -
Aev05g0822 817 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 438 564 IPR027417 -
Aev05g0822 817 MobiDBLite consensus disorder prediction 189 206 - -
Aev05g0822 817 PANTHER SNF2 DOMAIN-CONTAINING PROTEIN CLASSY 4 282 531 - -
Aev05g0822 817 Pfam Helicase conserved C-terminal domain 618 736 IPR001650 -
Aev05g0822 817 PANTHER SNF2 DOMAIN-CONTAINING PROTEIN CLASSY 4 20 250 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev05g0822 Aev-Chr5 5784189 5788210 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev05g0822 622 783 RAD5 or RAD16-like Gene Family AT5G05130 36.364 9.76e-18 86.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev05g0822 K10875 - jre:108991587 301.982
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev05g0822 05 5784189 5788210 Aev05g0822 05 5784189 5788210 ECH