Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev05g0806 ATGGCACCCTATCTTTTGTGTGGTGTGCTTTTTATTACCACCTTTATTTTCATGCAAACTTTGGCTGCAGATACTTCATGCACAGATTGTTTTGTAAATTCACGGGCAACATATTACCCAAATTCTGAAGAACATGGAACAGATGTTGGTGCATGTGGATTTGGTTCCTTTGGTGCTACGGTGAATGGCGGCGACGTATCAGCTGCGTCTAGTCTCTATCGAGACGGGGTTGGCTGTGGTGCCTGTTACCAGGTGAGGTGTACCAACAGTGCATACTGCTCAGATAATGGTGTGAGTGTAGTGATAACAGACCAAGGGTCAAGTGATAACACTGATTTCATTCTCAGCAAACATGCTTTTGGTAGAATGGCTCAGACCACTGATGCAGCTGCTTCTCTTGTTGCATGCAGCTACCCTAACAAGAACATAACAATAAAGATAGATGAGAGCAGTGGCAACCCTGGTTACTTAGCTTTTGTCATTTTGTACCAACAAGGAAGGAAAGACATAACTGCTGTGCAGCTCTGTGAGACTCAGAACTTTGTGTGCAAGTTACTGGATAGGAGCCATGGTGCAGTGTGGACTACAACCTCACCACCAAGTGGAGCTTTATCTGTAAGGATGTTGTTCAGTGATGAACAAGAGGAAGATGAAACATGGCTTGTTCCTCTTAATAACATTCCTGCTAATTGGAAGCCTGGAGATACATACGACTCTGGGGTACAAGTGAACAACCAATAG 741 0.4413 MAPYLLCGVLFITTFIFMQTLAADTSCTDCFVNSRATYYPNSEEHGTDVGACGFGSFGATVNGGDVSAASSLYRDGVGCGACYQVRCTNSAYCSDNGVSVVITDQGSSDNTDFILSKHAFGRMAQTTDAAASLVACSYPNKNITIKIDESSGNPGYLAFVILYQQGRKDITAVQLCETQNFVCKLLDRSHGAVWTTTSPPSGALSVRMLFSDEQEEDETWLVPLNNIPANWKPGDTYDSGVQVNNQ* 247
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev05g0806 246 Pfam Expansin C-terminal domain 143 214 IPR007117 -
Aev05g0806 246 ProSiteProfiles Expansin, Cellulose-binding-like domain profile. 155 239 IPR007117 -
Aev05g0806 246 PANTHER EXPANSIN-LIKE B1 10 244 - -
Aev05g0806 246 Gene3D - 140 243 IPR036749 -
Aev05g0806 246 SUPERFAMILY Barwin-like endoglucanases 19 126 IPR036908 -
Aev05g0806 246 PRINTS Expansin/Lol pI family signature 225 239 IPR007118 GO:0005576
Aev05g0806 246 PRINTS Expansin/Lol pI family signature 69 87 IPR007118 GO:0005576
Aev05g0806 246 PRINTS Expansin/Lol pI family signature 30 45 IPR007118 GO:0005576
Aev05g0806 246 ProSiteProfiles Expansin, family-45 endoglucanase-like domain profile. 49 138 IPR007112 -
Aev05g0806 246 Pfam Lytic transglycolase 69 127 IPR009009 -
Aev05g0806 246 SUPERFAMILY PHL pollen allergen 141 239 IPR036749 -
Aev05g0806 246 PANTHER EXPANSIN-B3 10 244 - -
Aev05g0806 246 Gene3D - 18 139 IPR036908 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev05g0806 Aev-Chr5 5623814 5625387 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev05g0806 9 241 Expansin Gene Family AT4G17030 39.592 1.17e-53 172
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev05g0806 - - gmx:100783848 427.557
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev05g0806 05 5623814 5625387 Aev05g0806 05 5623814 5625387 ECH
Aev05g0806 05 5623814 5625387 Aev01g0424 01 3637326 3639321 PCT