Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev05g0799 ATGCCTCAATCGCAATTATATGCATCAATGTGCATAAGGGGACTGAGTGACGATGCCAAACCAGCTATGGTTTGCACTGCCAATGATTTACAGGGATGGAAAGACTTCCCAAAGGGGCTTAGGGTTCTTTTCCTTGGAAGGGACTCCGGTTCGGCTTCCGAGATAAGAGCTAAACTCGAGGCCATGGACTATGATGTTTCTATCTTCTACGATGAGAATGAAGCCTTGTCAGCAATGTCAAGTAGACCGGAAGGCTTTCATGTTGCTATTGTGGAGGTGAGTACAAGCAGCAGCCAGGGTGGTTTCAAATTTCTTGAGAATGCCAAGGACTTGCCAACCATTATGACATCAGAGAATCAGTGCCTGAGCACTATGATGAAGTGCATTGCGCTTGGCGCGGTTGAGTTCCTAAGCAAACCACTTTCTGAGGATAAACTTAGAAATATCTGGCAGCATGTGGTTCACAAGGCATTCAATGCTGGGGGAAGTGTACTGTCTGAATCACTTAAACCTGTCAGAGAGTCTGTAGAATCCATGTTGCAGCTCAAAACAGAAAACGGACAACGTGAAAGTAGAATCGCAGTAGATGTAGAGAACCTGTCCAGGTTTAGTGATAACGAGCATGATCAGTCTGCTGGAAGTGATAAATATCCAGCACCTTCGACGCCACAATTAAAACATGGAGCAAGGTTACTGGATGATGGTGATTGCCAAGAGCAGACTAATTGCTCAATTGAGAAAGAAAGTGGGGAACAGGATGGAGAATCTAAATCTGTCGAAACTTCGTGTGAGAATTTGAATGCCGAGAGTACTCCTCAAGCACAGAAAACTGAAAAGACTCTGATTAAGGATGAAGAGGGGTTTGCTAATGGTTCCAAGTGTGAGAGTGTTGTTGTTTCTGCGGATCGTCATAATAGAAAGTTTCTCAGAAAAACTGCTGGAAATATTAAATCTCCTAATAAAGGCGGTGTTCCTAGTGATTCATGTGAAAATAAAGCTAATCGGAAGAAGATTAAAGTAGACTGGACGCCTGAGTTGCACAAAAAATTTGTGCAGGCTGTGGAACAACTAGGTATCGATCAAGCCATTCCTTCTCGTATATTGGAGCTCATGAAGGTGGATAACTTAACAAGGCATAATGTGGCGAGCCATCTTCAGAAGTATAGAATGCACAAGAGACTAGTGATGCCTAAGGAAGATGATCGAAGACGATGGCAAAATCAAAGAGATTCAACACAGAGGAGCTATTGTATGCAAAGACCAATTATGGCTTACCCTCCCTATCTTAATAACCACACTCTTCCTCCAGCTCCTCCTGTGTATCCTATGTGGGGCCCTCCTAGTTATCCCATTTGGCAACCTACTGAAAGTTGGCACTGGAAGCCATATCCAGGGGTGCACGTGGATGCATGGGGTTGCCCTGCAGTGTTGCCACCTTCACATCAAGCTCCTTATTTTTCTTACACTCAAAATATGGCTGGATTGCACAATTCTAAAGCAGAGGATTGTAGATTTAGCTTGCCACCAAGTTCATTTGAAGAGCATAATCCGGCAGATGAAGTTGTTGACAGAGTTGTGAAGGAAGCAATGAGCAAGCCATGGCTGCCATTACCCTTAGGCTTGAAACCTCCTTCCACTGACAGTGTCTTGAATGAGCTCTCCAAGCAAGGCATTTCCACCATCCCAAGGGCTCCTAACCCCACTCAATAA 1710 0.4439 MPQSQLYASMCIRGLSDDAKPAMVCTANDLQGWKDFPKGLRVLFLGRDSGSASEIRAKLEAMDYDVSIFYDENEALSAMSSRPEGFHVAIVEVSTSSSQGGFKFLENAKDLPTIMTSENQCLSTMMKCIALGAVEFLSKPLSEDKLRNIWQHVVHKAFNAGGSVLSESLKPVRESVESMLQLKTENGQRESRIAVDVENLSRFSDNEHDQSAGSDKYPAPSTPQLKHGARLLDDGDCQEQTNCSIEKESGEQDGESKSVETSCENLNAESTPQAQKTEKTLIKDEEGFANGSKCESVVVSADRHNRKFLRKTAGNIKSPNKGGVPSDSCENKANRKKIKVDWTPELHKKFVQAVEQLGIDQAIPSRILELMKVDNLTRHNVASHLQKYRMHKRLVMPKEDDRRRWQNQRDSTQRSYCMQRPIMAYPPYLNNHTLPPAPPVYPMWGPPSYPIWQPTESWHWKPYPGVHVDAWGCPAVLPPSHQAPYFSYTQNMAGLHNSKAEDCRFSLPPSSFEEHNPADEVVDRVVKEAMSKPWLPLPLGLKPPSTDSVLNELSKQGISTIPRAPNPTQ* 570
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev05g0799 569 Gene3D - 40 160 - -
Aev05g0799 569 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 337 392 IPR006447 GO:0003677
Aev05g0799 569 Pfam Myb-like DNA-binding domain 340 389 IPR001005 -
Aev05g0799 569 Gene3D - 333 395 - -
Aev05g0799 569 SUPERFAMILY CheY-like 38 156 IPR011006 -
Aev05g0799 569 MobiDBLite consensus disorder prediction 189 212 - -
Aev05g0799 569 PANTHER TWO-COMPONENT RESPONSE REGULATOR-APRR2-LIKE PROTEIN 23 559 - -
Aev05g0799 569 PANTHER TRANSCRIPTION ACTIVATOR GLK1 23 559 IPR044825 GO:0003700|GO:0045893
Aev05g0799 569 SUPERFAMILY Homeodomain-like 336 392 IPR009057 -
Aev05g0799 569 ProSiteProfiles Response regulatory domain profile. 41 154 IPR001789 GO:0000160
Aev05g0799 569 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 334 393 IPR017930 -
Aev05g0799 569 MobiDBLite consensus disorder prediction 259 277 - -
Aev05g0799 569 MobiDBLite consensus disorder prediction 183 277 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev05g0799 Aev-Chr5 5591534 5598387 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev05g0799 23 564 Response Regulator Gene Family AT4G18020 49.296 2.59e-148 436
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-ARR-B Aev05g0799 Myb_DNA-binding 8e-09 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev05g0799 - - gmx:100784905 815.068
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev05g0799 05 5591534 5598387 Aev01g0431 01 3706229 3712100 PCT