Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev05g0782 ATGGGTTGCTCTGTGAAAGACAAAGACAAGAACGTGCGAGCAAAGTGGAAGCCTCCATCGCTTAAACCTGATTCCAATCCCAAACCGGATTCTTGCTCTCAACCGATCATGACGAAGCAGTGCTCCACAAACCCCTCTAATCCCAACCCTAACCCTAACCCTAACCCTAATCTTGCTCCTACTGGGTGGGGTTTCTGCACCGAAGATGAACTGCAAGAGCTTCTCTTGAAGAACATGGAAATCGTGTACAACGAGGTCATTTCGAAGCTTGTGTCTTTGGGCTACGATGAGGACGAGGCCGTCAATGCGGTGCTGCACAATGGGCACTGCTATGGCGGCATGGATGTGTTGGAGAACATAATGAACAACTCCGTGGCTTATTTGGAAAATAACGGCAAATTGGAGGGTGAGAAGGGGTTTGGGTCTGATCGTGGAGGGTTCCCTGACATGAAGCAGTTAGAGGCTTTCTCTCTGGCTGCTATGGTGTGCCTCTTGCAGCAATTGAGGCCCAATTTGAGTAAAGGTGATGCGTTGTGGTGTTTGCTTGTGAGTGATTTTCATGTGGGAAAGGCAAGCTCAATTCAAATTCCATCTGCCAATGGGGCGTGTTGTTGTTCTTCTGCTGCTACTGCTAATGCTCGTGGTGACAATGCAGCCCCGACTCTTTGTAGATTTCATGGGGACTGGGCATTTGAAAATGGGGAATGCATGGATCTTCCGATCACTGGGATCCTCCCTTGTGGCACCACGGTAAATTTGAAGTTGCACAGAGAAATAGAGTTCCCACTGAAGTATAATCTTTCTCCTACCATGAAGTCCTATTTGAAAAGAAATGTAGCAATGTGCGCTGCTTGGTATAGGGTTAACTCGAAACAGTTGCAGTTACAAGCCTTGGCCTCAGCCGTTGATGGTAACACTGCATCTGCAGCTGTTTCTTGGGTTGGTGCCCCGGGGGATCAGTTTGGTGACCCTCGCAATCCGAATGCCCTAGATGCTTGGAACTCAATGCTGAGTAAATTTCATGAGCTAAATCTTGATGAGTATGTGGAGTCTGCTGTTGCAGGAGATAAGAAGAATGAGATGATAGTCACTCTGATTCATCAGGTTAAGGAACTTGAGAAAGATGCCAAGGTCCGGAAAGATTGGGCTCTTCAGAAGGCCGTGCAAGCAGCAAGAACGCTTAGCGATAATTTGACTGAGCTGAAAACATTAAGGATGGAAAGAGAGGAGATTCAGAGATTGAAGAAAGCGAGACAAATGCTTGAGGATACGACTATGAAGAGACTGTCAGAGATGGAGGAATCCTTGAGAAAAGCTAGTGGTCAAGTGGACCAGGCAAATGCAGCTGTGAAAAAACTAGAGACAGAGAATGCAGAAATCAAAGCTGAATTGGAGGCAGCTAAATTAAGTTCATCAGAGTCTGTCAAAAGCTATATGCAAGTTACTAAGAGGGAGAAAAAATGCTTAAAGAAGCTTATAGCTTGGGAAAAACAGAAAGATAAGATGCAGCAGGAGATTTCAGATGAAAAACAGAAGATACTGGAGATAGAAGAGGAATTGGCTTGGATTAGACAGCGTGCAAAAGAAGCAGAGGTCAAGGGCAGGGAAGGGTTGAAGGCCAAAGAGGAAGCCCTAGCATTAATTGAGGAGGAACGCCGTTCAAAGGAAGCAGCCGAGGCCGAAAATAAGAGAAATCTTAAGGCTTTACGCTTGAAGATAGAGATAGATTTTCATCGTCGCAAGGATGATCTCCAAAGGCTTGAGCAGGAGCTTTCATGCCTCAAAGCATCTTCTCAGACAGCTGTTCTGCGTTATCAATCACATACCTCACCAGCAAGCGAGTCTGAGGGTGAGACAATCGCTAAGCTTCTTCAAGAATTAGATAATCTAGAGGATTTTTCAGAAAAGGAGGTCAAAGGTGCTAGAGAATGTATCATATGCATGGAAGGTGAAGTTTCAATCATTTTCTTGCCTTGTGCACACCAAGTAATGTGTACCAGTTGCGGCGAAGAGTATGGGAGGAAGAGCAGAGCTGCTTGTCCATGCTGCCGGGTTCCGATTGAGCAGAGAATCCGTGTATATGGAGCTGGTTCTTAA 2097 0.4588 MGCSVKDKDKNVRAKWKPPSLKPDSNPKPDSCSQPIMTKQCSTNPSNPNPNPNPNPNLAPTGWGFCTEDELQELLLKNMEIVYNEVISKLVSLGYDEDEAVNAVLHNGHCYGGMDVLENIMNNSVAYLENNGKLEGEKGFGSDRGGFPDMKQLEAFSLAAMVCLLQQLRPNLSKGDALWCLLVSDFHVGKASSIQIPSANGACCCSSAATANARGDNAAPTLCRFHGDWAFENGECMDLPITGILPCGTTVNLKLHREIEFPLKYNLSPTMKSYLKRNVAMCAAWYRVNSKQLQLQALASAVDGNTASAAVSWVGAPGDQFGDPRNPNALDAWNSMLSKFHELNLDEYVESAVAGDKKNEMIVTLIHQVKELEKDAKVRKDWALQKAVQAARTLSDNLTELKTLRMEREEIQRLKKARQMLEDTTMKRLSEMEESLRKASGQVDQANAAVKKLETENAEIKAELEAAKLSSSESVKSYMQVTKREKKCLKKLIAWEKQKDKMQQEISDEKQKILEIEEELAWIRQRAKEAEVKGREGLKAKEEALALIEEERRSKEAAEAENKRNLKALRLKIEIDFHRRKDDLQRLEQELSCLKASSQTAVLRYQSHTSPASESEGETIAKLLQELDNLEDFSEKEVKGARECIICMEGEVSIIFLPCAHQVMCTSCGEEYGRKSRAACPCCRVPIEQRIRVYGAGS* 699
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev05g0782 698 MobiDBLite consensus disorder prediction 1 62 - -
Aev05g0782 698 Coils Coil 429 470 - -
Aev05g0782 698 Pfam Family of unknown function (DUF6592) 78 191 IPR046527 -
Aev05g0782 698 PANTHER RING/U-BOX SUPERFAMILY PROTEIN 1 696 - -
Aev05g0782 698 PANTHER OS05G0141500 PROTEIN 1 696 IPR046934 -
Aev05g0782 698 SUPERFAMILY RING/U-box 622 690 - -
Aev05g0782 698 MobiDBLite consensus disorder prediction 26 46 - -
Aev05g0782 698 Coils Coil 492 533 - -
Aev05g0782 698 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 622 695 IPR013083 -
Aev05g0782 698 SMART ring_2 644 683 IPR001841 -
Aev05g0782 698 Coils Coil 538 568 - -
Aev05g0782 698 Coils Coil 404 424 - -
Aev05g0782 698 MobiDBLite consensus disorder prediction 1 17 - -
Aev05g0782 698 Pfam Zinc finger, C3HC4 type (RING finger) 642 689 - -
Aev05g0782 698 ProSiteProfiles Zinc finger RING-type profile. 644 684 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev05g0782 Aev-Chr5 5481592 5484701 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev05g0782 624 694 C3H Transcription Factor Family AT1G73950 34.667 1.25e-07 52.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev05g0782 - - gmx:100797917 761.911
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev05g0782 05 5481592 5484701 Aev01g0450 01 3919614 3924725 PCT