Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev05g0779 ATGGATTCTCGGGAACCGCACCACCCACCACCCCCATCGCACCACCACCACCACCAACCACCCAACATCATGGTCGGCGTGGGACCCACTCCCTACAACCCTTCCATGATGGCCCCTGCCACCGCCCGATTTCCCTTCGCCTCCTCCGTCCACCCCCACCACAACCACCACCAACAACCACCAGCTCCATCTAACAACAACAACAACAACCCTACCGAGCCCTTCAACAATAACAACGGAAACAACAACACCACCACCAACAACAACAACGCCACTTACGACGGTGCTGCGTTGAAGCCTTGCGGTTTCCCTAACACCACCGAACCCTCCTCCGCTAAGAAGAAAAGGGGCCGTCCAAGAAAGTATTCTCCCGATGGCAACATTGCCTTGGGTCTCGCACCAACCCAGGCGTCCCCTTCTCCTGCCGCCGCACCACGCGCCGATTCCTCAGCCGGAGGAGGATCCACCCCTTCATCGGAGCCTCCGGCAAAGAAGCATAGAGGCAGGCCACCTGGCTCCGGAAAGAAGCAGATGGATGCCCTTGGAGCTGGTGGGATTGGTTTTACTCCGCATGTGATCTTGGTGGAATCCGGTGAGGACATTGCAGCTAAAGTTATGGCGTTTTGTCAGCAAGGACCTAGGACTGTTTGCATTCTTTCTGCACATGGTGCAATCTGCAATGTCTCCATTCGACAGGGGGCAATGTTAGGGGGTACTGTGACATACGAGGGCCGATATGAAATAATATCTCTGTCAGGTTCTTTACTACAATCTGACAATAATAGTGGACGTAGCAGATCAGGTGGCTTGAGTGTGTCACTTGCAGGGTCTGACGGACGAGTTTTTGGTGGTGGAGTTGTTGGGGCGCTAACTGCAGCAACACCAGTACAGGTCATCGTGGGTAGCTTTATTGTGGATGGCAAAAAGTCCAATGTCTCAAACAACCATAAATCTGGGCCTTCATCAACACCATCATCGCAGATGTTAAACTTTGGTGCTCCTGTGACTCCTACCAGTCCCACCTCTCAGGGACCTTCATCTGAATCCTCTGATGACAATGATAATAGTCCTCCTTTTAATAAGGGGCCTGGACTCTACAGTAATGCTACTCAGCCCCTTCATAATATGCCAATGTACCATCATCATCAGCTATGGGCTGGCCAAACTCAGCAGTGA 1176 0.5264 MDSREPHHPPPPSHHHHHQPPNIMVGVGPTPYNPSMMAPATARFPFASSVHPHHNHHQQPPAPSNNNNNNPTEPFNNNNGNNNTTTNNNNATYDGAALKPCGFPNTTEPSSAKKKRGRPRKYSPDGNIALGLAPTQASPSPAAAPRADSSAGGGSTPSSEPPAKKHRGRPPGSGKKQMDALGAGGIGFTPHVILVESGEDIAAKVMAFCQQGPRTVCILSAHGAICNVSIRQGAMLGGTVTYEGRYEIISLSGSLLQSDNNSGRSRSGGLSVSLAGSDGRVFGGGVVGALTAATPVQVIVGSFIVDGKKSNVSNNHKSGPSSTPSSQMLNFGAPVTPTSPTSQGPSSESSDDNDNSPPFNKGPGLYSNATQPLHNMPMYHHHQLWAGQTQQ* 392
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev05g0779 391 CDD DUF296 189 303 IPR005175 -
Aev05g0779 391 MobiDBLite consensus disorder prediction 309 374 - -
Aev05g0779 391 MobiDBLite consensus disorder prediction 52 94 - -
Aev05g0779 391 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 9 39 382 IPR039605 GO:0003680
Aev05g0779 391 SMART AT_hook_2 113 125 IPR017956 GO:0003677
Aev05g0779 391 SMART AT_hook_2 164 176 IPR017956 GO:0003677
Aev05g0779 391 Pfam Plants and Prokaryotes Conserved (PCC) domain 190 303 IPR005175 -
Aev05g0779 391 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 13-LIKE ISOFORM X1 39 382 - -
Aev05g0779 391 MobiDBLite consensus disorder prediction 1 181 - -
Aev05g0779 391 Gene3D - 190 317 - -
Aev05g0779 391 ProSiteProfiles PPC domain profile profile. 184 325 IPR005175 -
Aev05g0779 391 SUPERFAMILY AF0104/ALDC/Ptd012-like 188 304 - -
Aev05g0779 391 Coils Coil 388 391 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev05g0779 Aev-Chr5 5460302 5464279 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev05g0779 112 391 AT-hook Motif Nuclear Localized (AHL) Family AT4G17950 50.160 2.93e-78 246
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev05g0779 - - qsu:112011718 381.719