Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev05g0772 ATGGAGGAATTAAACGCATCCCCATCAAACTGGTTGTCTAATCTGGAAAAGGAAATGGATGATTATGATTTGTTTGCACAATGCGAGGGGCTGAACTTTCTGGAGGATAATGAAGAAGAATTTCTTTCTAATGAGATAATGATGAGTGCCCTGCATCAGAGTGAGCCTCCTCTGTCTTCGGAGAGCAACAAGTCTTGCTTGAATAATTATGATGAAATGAGTTCCAAGATCAGGCCAACCAAGCACCTCAAAACCAATAGTAATAGCTTCAACTCTTCTTCCATCACCGAAAATAATAATATTATTAATAATAGCTTTTCACCACCACCTTCATCCTCTTGTCTCTCTTCTTCCCCGACTTCCCAGATTCTTTCCTTTGATGCCTCTAATAACTCATCATCCCCTGCCAACTCCAACACCCAGTTTCATGGCTTTGATTTTATTAGCAGCTTAAACCCGAAACAGAACGGGGCGGAATCTACTGTTTCACCGCCACAATTGGGTCAACCCCAAAATGGGTCATCAGAAAAGAAAACTCCTCTAGGCCAAGGGACGAAGAGGCCCCACGCTCAAGCTCAGGATCACATCCTGGCAGAGAGAAAGCGAAGAGAGAAGCTCAGCCAGAGCTTAATTGCTCTTGCAGCTCTCATTCCAGGCTTGAAGAAGATGGACAAGGCTTCGGTACTAGGAGATGCGATAAAGTACGTGAAAGAGCTACAAGAGCGTTTGAAAGTGCTGGAACATGATAACAACAAGATCAGATCATCGGTGGAGTCTGTGGTCATTGTCAAGAAGCCACCACAGCTCAGCACCGACGACGATTCCTCCTCCTCTGATGAGAGCTTCGAAGCTGCTAGTGGCGGTGGCGGTGGCGGTGCTCTTCCCCACGTCGAAGCAAGAGTAGCAGACAAGGAGGTGCTCCTTCGGATCCACTGCCAGAACCAGAAGGGCCTTTATGTCAAACTACTTGCCCAGATTCAAAGCCTTCACCTCTTTGTTTCTAACAGCAGTGTCCTACCTTTTGGGGATTCTGTCCTAGACATAACCATCGTTGCTCAGATGGGAAGGGATTACAACTTGACCATAAGAGATCTTGTAAGAAGCCTACGCGTGGCCACATTGAAATCCATGTCATGTCATAGCAGCTAG 1149 0.4621 MEELNASPSNWLSNLEKEMDDYDLFAQCEGLNFLEDNEEEFLSNEIMMSALHQSEPPLSSESNKSCLNNYDEMSSKIRPTKHLKTNSNSFNSSSITENNNIINNSFSPPPSSSCLSSSPTSQILSFDASNNSSSPANSNTQFHGFDFISSLNPKQNGAESTVSPPQLGQPQNGSSEKKTPLGQGTKRPHAQAQDHILAERKRREKLSQSLIALAALIPGLKKMDKASVLGDAIKYVKELQERLKVLEHDNNKIRSSVESVVIVKKPPQLSTDDDSSSSDESFEAASGGGGGGALPHVEARVADKEVLLRIHCQNQKGLYVKLLAQIQSLHLFVSNSSVLPFGDSVLDITIVAQMGRDYNLTIRDLVRSLRVATLKSMSCHSS* 383
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev05g0772 382 MobiDBLite consensus disorder prediction 101 120 - -
Aev05g0772 382 Coils Coil 229 256 - -
Aev05g0772 382 MobiDBLite consensus disorder prediction 264 294 - -
Aev05g0772 382 MobiDBLite consensus disorder prediction 126 195 - -
Aev05g0772 382 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 190 239 IPR011598 GO:0046983
Aev05g0772 382 Pfam Helix-loop-helix DNA-binding domain 193 240 IPR011598 GO:0046983
Aev05g0772 382 MobiDBLite consensus disorder prediction 126 181 - -
Aev05g0772 382 SMART finulus 196 245 IPR011598 GO:0046983
Aev05g0772 382 PANTHER BHLH TRANSCRIPTION FACTOR 4 378 - -
Aev05g0772 382 Gene3D - 184 256 IPR036638 GO:0046983
Aev05g0772 382 PANTHER BASIC HELIX LOOP HELIX (BHLH) DNA-BINDING FAMILY PROTEIN 4 378 - -
Aev05g0772 382 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 194 257 IPR036638 GO:0046983
Aev05g0772 382 MobiDBLite consensus disorder prediction 269 283 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev05g0772 Aev-Chr5 5394382 5397068 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev05g0772 95 372 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G37850 43.571 1.94e-55 183
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Aev05g0772 HLH 4.1e-09 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev05g0772 - - adu:107487595 294.664
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev05g0772 05 5394382 5397068 Aev01g0459 01 4061535 4066299 PCT