Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev05g0770 ATGATGGAAATTGCATCCACCAACTATTTGGCTGACCTTCTGCAGGTAGATGTAATGGAAGATTATCCAGTAACCACGTTTGATGAATACCCAACGGTGGAGGATTGTTTTGCTTACACGCTTGATGATGAGATTAATAAGTCCTTGTCATCAGATCATGAGTTTGTTGCCCCACCAACAGCAAGGGCAACCAAGAAACTCAAGACATTTGAAACGATGCCTCCTCCTCCTCCTACTCCATCATCCCAACATATTATATCATTTGACCACCACTACTCATCATCACAAGTTGCTCATGACGAGGATGAGGACTGCACTATTTTATTCAATTATGATCATAGTAGAAAGTATTACAAGGCTGCAACAACAGCTAGGAACCCAGTCCAAGCTCAAGAGCACGTAATTGCCGAGAGAAAACGAAGGGAAAAGCTCAGCCAGAGCTTCGTTGCTCTTTCTGCTATGCTTCCCGGCCTCAAGAAGATGGATAAGGCTTCAATATTGGGAGATGCGATCAAGTATGTGAAGCAACTTGAGGAACGGCTTCAGATTCTGGAGGAGGAACAAGCAACGAATGAGAGAACAATAGAATCGGCAGTGCTTGTGAAGAGATGTTATATGTTCGATGATGAAAATAATAATAATTGTAACAGCAGGCAGCAGTATGAGGAGTGGTCGTCGTCATCGTCATCATCATCACTCCCGGAAATGCAAGCAAGAGTTAGTGGAAAAGAGGTACTGATCAGAGTCCAGTGTAAAAAAGAGAATGGGCGTGAGGCTATTGCTGCAATACTCACCCAATTGGAGAAGCACCACCTCATTGTACAAACTACCACCTCCTTGCCCTTCGGGTCTAACACTCTTGATATTACTATTCTTGCTCAGATGAAGGAGGAATACTTGATGAGTGCAAAGGAACTCCTAGGAAGCCTACGGTTGGCTTTGACGTGCACTAGTTCTTAA 960 0.4375 MMEIASTNYLADLLQVDVMEDYPVTTFDEYPTVEDCFAYTLDDEINKSLSSDHEFVAPPTARATKKLKTFETMPPPPPTPSSQHIISFDHHYSSSQVAHDEDEDCTILFNYDHSRKYYKAATTARNPVQAQEHVIAERKRREKLSQSFVALSAMLPGLKKMDKASILGDAIKYVKQLEERLQILEEEQATNERTIESAVLVKRCYMFDDENNNNCNSRQQYEEWSSSSSSSSLPEMQARVSGKEVLIRVQCKKENGREAIAAILTQLEKHHLIVQTTTSLPFGSNTLDITILAQMKEEYLMSAKELLGSLRLALTCTSS* 320
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev05g0770 319 Coils Coil 167 194 - -
Aev05g0770 319 PANTHER TRANSCRIPTION FACTOR NAI1 46 315 - -
Aev05g0770 319 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 128 177 IPR011598 GO:0046983
Aev05g0770 319 PANTHER BHLH TRANSCRIPTION FACTOR 46 315 - -
Aev05g0770 319 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 132 194 IPR036638 GO:0046983
Aev05g0770 319 SMART finulus 134 183 IPR011598 GO:0046983
Aev05g0770 319 Pfam Helix-loop-helix DNA-binding domain 131 178 IPR011598 GO:0046983
Aev05g0770 319 Gene3D - 128 202 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev05g0770 Aev-Chr5 5380375 5381856 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev05g0770 119 315 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G37850 45.685 7.26e-50 167
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Aev05g0770 HLH 1.2e-10 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev05g0770 - - aip:107642660 256.144
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev05g0770 05 5380375 5381856 Aev05g0770 05 5380375 5381856 ECH