Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev05g0757 ATGGGTCTTGATCATGATGCCAATAACTCATCAAGCCTTGAGCTTGGTCTAGGGTTATCTCTGACCACTACTACTACTACTAACTCAGAGGAAACCACCACAATTCCTCCTCCATCAAGCAATAAGCCCGGTGGTGATGATAACAACAATAATAATATTTGCATGATGAAGGCAACGCCAATGAAGCCTATCCTTAAGGCTGAATCTGAAGCAGAGCCAACCTTAACGCTGGGTCTTTCCGGTGAGAACTACCACCGGCAGCAGCAGGTGACAGTAGTAGTGCCCAAAAACAGGATGACGATGGATAATAATACCAACAAGGAGGTCGCTGCTGCCTTATACTGCGAGGAGGCTGCTGCTACTGTTGTTGAAGTGATGTCGAGGCAGACATCGCCTCACAGCGTGGTTTCTTCGTTCTCGAGTGGGAGGGTAGTGGTGAAGAGGGAGAGGGGGGATGTAAGCTGTGAAGTGGATGCAGAGATAGAGGGTGCAGAGAGGGTATCTTCCAGAGCCAGTGATGAAGACGAAGACGCCATCAATGCCAGGAAGAAACTCAGGCTCACCAAGGAACAATCTGCTCTCCTAGAAGACAGCTTCAAACAACACAGCACTCTCAATCCTAAACAGAAGCAAGCTTTGGCCAGACAACTAAATCTACGCCCTCGACAAGTTGAGGTCTGGTTCCAGAATCGAAGAGCTAGGACAAAGCTGAAGCAGACGGAGGTGGACTGCGAGTTCCTAAAGAAGTGCTGCGAAACGCTGACGGACGAAAACAGAAGGCTGAAGAAGGAGCTGCAGGAGCTGAAGGCGCTGAAGCTGTCGCAGCCTCTGTACATGCCTATGCCTGCTGCCACGCTTACCATGTGCCCTTCGTGCGAGAGGCTCAACGACGTCGTCACCACTCCTGCTCCCAATAAGAGTCCCTTCTCCAACGCTCACTTCTATAACCCCTTCACCAATCCTTCCGCAGCATGTTAA 978 0.5041 MGLDHDANNSSSLELGLGLSLTTTTTTNSEETTTIPPPSSNKPGGDDNNNNNICMMKATPMKPILKAESEAEPTLTLGLSGENYHRQQQVTVVVPKNRMTMDNNTNKEVAAALYCEEAAATVVEVMSRQTSPHSVVSSFSSGRVVVKRERGDVSCEVDAEIEGAERVSSRASDEDEDAINARKKLRLTKEQSALLEDSFKQHSTLNPKQKQALARQLNLRPRQVEVWFQNRRARTKLKQTEVDCEFLKKCCETLTDENRRLKKELQELKALKLSQPLYMPMPAATLTMCPSCERLNDVVTTPAPNKSPFSNAHFYNPFTNPSAAC* 326
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev05g0757 325 CDD homeodomain 182 239 IPR001356 GO:0003677
Aev05g0757 325 ProSitePatterns 'Homeobox' domain signature. 213 236 IPR017970 GO:0000981|GO:0006355
Aev05g0757 325 ProSiteProfiles 'Homeobox' domain profile. 178 238 IPR001356 GO:0003677
Aev05g0757 325 SUPERFAMILY Homeodomain-like 180 239 IPR009057 -
Aev05g0757 325 Pfam Homeodomain 182 236 IPR001356 GO:0003677
Aev05g0757 325 Gene3D - 186 236 - -
Aev05g0757 325 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN HAT9 33 325 - -
Aev05g0757 325 Coils Coil 244 274 - -
Aev05g0757 325 MobiDBLite consensus disorder prediction 23 52 - -
Aev05g0757 325 PANTHER - 33 325 - -
Aev05g0757 325 SMART HOX_1 180 242 IPR001356 GO:0003677
Aev05g0757 325 SMART halz 238 281 IPR003106 GO:0006355|GO:0043565
Aev05g0757 325 Pfam Homeobox associated leucine zipper 238 272 IPR003106 GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev05g0757 Aev-Chr5 5300449 5301916 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev05g0757 1 325 Homeobox Transcription Factor Family AT4G37790 52.522 7.90e-89 265
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Aev05g0757 Homeodomain 2.4e-16 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev05g0757 K09338 - gmx:100795135 334.339
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev05g0757 05 5300449 5301916 Aev01g0470 01 4184797 4187247 PCT