Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev05g0754 ATGGGAAGGGCTCCTTGCTGTGACAAAGCGAACGTGAAGAAAGGGCCATGGTCGCCTGAAGAGGACGCAAAGCTCAAGGCTTATATCCAACACCACGGTACCGGCGGCAACTGGATTGCCCTGCCCCAGAAGATAGGGCTGAAGAGGTGTGGGAAAAGCTGTCGTCTTCGATGGCTGAATTATCTTCGGCCAAACATCAAACATGGGGGCTTCTCTGAAGAAGAAGATAACATCATTTGCAGCCTGTATGTTAGTATTGGAAGCAGGTGGTCAATAATAGCAGCACAATTACCAGGGAGGACAGATAATGACATAAAGAACTACTGGAACACTAGGCTCAAGAAGAAGCTCCTTGGAAAGCATAATAATAAGGAGAACCAAGCTCAACCACGCAGATTCACCACCCTAATCAAGCAGCAGCAGCAGCAGCAGCAGCAAGATCACATCATTCCTACTCCTAATTATTGGCCTGCTGCAGCAGAGCAATATTGTGTGCCTGCACCCATTGTGCCATTAATTATTCCAAATAATAATAACAACATCGTCCAGCAAGCTGATGACCAATCACCATCATCCCTCACCAGCTTTCTGAAAGAGCTAGATGGAATCAAATTCTCCCATGATGATCAACCATATATCCTTAACAATAATTCTTCTTCTCATTGCGAAAACCAGCAGCTGGTTTATCATCCAACCACAATGGTGCTGAGTAGTAGTAGTAGTAGTAGTGATGATGCTGCCAACATATTTCATCAAGGCAGCTATTATTATGATGAAAACAACTTATTGTTCCCGACAAGTGGTGATGAGGATGGTTTGATGATGAGTAGTCATCTAGTCTCTTCTGTGAACCCCCCGCCGCAAGAGCAAGCTGCTGCATGTTTCTATGGAAGCACCTCAACAACAGATCAATGCACTGCTAGCTATACTTGGGGAGACATGACCTCTTTCCTAACTAATTACTCACCCAATTTGGATCATCACTATAGTAATAGTAATAATAATAATAATGATGGTTGCCGACAAGCAGGAACTCCTCCTCCTCCTCCTCAAGATGCCAATAGGTACTTTGGTATCCAATTGCAATAA 1089 0.4417 MGRAPCCDKANVKKGPWSPEEDAKLKAYIQHHGTGGNWIALPQKIGLKRCGKSCRLRWLNYLRPNIKHGGFSEEEDNIICSLYVSIGSRWSIIAAQLPGRTDNDIKNYWNTRLKKKLLGKHNNKENQAQPRRFTTLIKQQQQQQQQDHIIPTPNYWPAAAEQYCVPAPIVPLIIPNNNNNIVQQADDQSPSSLTSFLKELDGIKFSHDDQPYILNNNSSSHCENQQLVYHPTTMVLSSSSSSSDDAANIFHQGSYYYDENNLLFPTSGDEDGLMMSSHLVSSVNPPPQEQAAACFYGSTSTTDQCTASYTWGDMTSFLTNYSPNLDHHYSNSNNNNNDGCRQAGTPPPPPQDANRYFGIQLQ* 363
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev05g0754 362 CDD SANT 71 113 IPR001005 -
Aev05g0754 362 Gene3D - 69 149 - -
Aev05g0754 362 CDD SANT 16 62 IPR001005 -
Aev05g0754 362 SUPERFAMILY Homeodomain-like 11 109 IPR009057 -
Aev05g0754 362 ProSiteProfiles Myb-like domain profile. 9 62 IPR001005 -
Aev05g0754 362 PANTHER OS09G0431300 PROTEIN 1 320 - -
Aev05g0754 362 Pfam Myb-like DNA-binding domain 69 111 IPR001005 -
Aev05g0754 362 Pfam Myb-like DNA-binding domain 14 62 IPR001005 -
Aev05g0754 362 ProSiteProfiles Myb-like domain profile. 63 113 IPR001005 -
Aev05g0754 362 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 63 117 IPR017930 -
Aev05g0754 362 Gene3D - 7 68 - -
Aev05g0754 362 MobiDBLite consensus disorder prediction 328 342 - -
Aev05g0754 362 PANTHER OS09G0431300 PROTEIN 1 320 - -
Aev05g0754 362 MobiDBLite consensus disorder prediction 328 362 - -
Aev05g0754 362 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 62 IPR017930 -
Aev05g0754 362 SMART sant 13 64 IPR001005 -
Aev05g0754 362 SMART sant 67 115 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev05g0754 Aev-Chr5 5267035 5268350 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev05g0754 1 139 MYB Transcription Factor Family AT5G65790 82.014 1.33e-82 254
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Aev05g0754 Myb_DNA-binding 9e-14 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev05g0754 K09422 - gmx:106795158 278.1