Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev05g0744 ATGCCGATGTTTCAGCCTTGTAAAAGGGACATGGTTGCTGGGTTCGAGGGTGGTGGTGATGGCCAGATTCTAGATCTGGACACAGCGGTCAAAGACGGTGTCCTTGGTGGTGTCGAAGGTGGCGTCGTTGGAACTGGTGGTGTTTGTGAGAAATTGGATCTGAGGAAGATGATTGAGGAGCTCGACTTGTCAGAGGTTCCAACAGTGTTCATTTGCCCAATCTCCCTTGAACCAATGCAGGACCCCGTGACCCTTTGCACCGGCCAAACCTACGAGAGGTCCAACATCCTCAAATGGTTCAACTTGGGGCACTTCACATGCCCCACCACTATGCAGGAGCTTTGGGATGAGTCTGTCACTCCCAACACCACCCTCTACCGCCTCATCTACACTTGGTTCTCTCAGAAGTACCTCTTGATGAAGAAGAGGTCAGAGGATGTTCAAGGTAGGGCTTCTGAGCTTCTTGAGACACTGAAGAAGGTGAAGGGCCAGGCTCGTGTTCAGGCACTCAAGGAGCTTCACCAGGTTGTTGCTGCTCATGCCACTGCCCGCAAGACACTGATTGATGAAGGTGGTGTCTCTGTTATGTCCTCTCTGCTTGGCCATTTTACTTCCCATGCTGTTGGCTCTGAGGTCATTGGTATCCTTGTGTGCTTGACCCTTGATTCTGAATCCAAGAAGAATCTTATGCAGCCTGCTAAGATTTCCTTGATGGTGGATATCTTGAATGAGGGTTCTATTGAGACTAAGATCAATTGCACTAGGCTGATTGAGTCTTTGATTGATGAGGAGGATTTTCGTTCTGAGGTTATCTCGAGCCATAGCCTTCTGGTTGGGTTGATGAGGCTTGTGAAGGATAAGAGGCACAGCAATGGAATCTGTCCTGGGCTGAGCCTTCTAAGGGCAATTTGCTTGCATAAGGAAGTTAGGAATTTGCTTGTGAGCATTGGTGCTGTTTCCCAATTGGTTAAATTGTTGTCTGGTTTGGAACCTGATTGTTTGGAATTGGCACTTTGTGTGTTGGATGCATTGGCATCTATACCTGAAGGCAGGGTGGCTTTGAAGGATTGTCCTAACACCATTCCTATTATGGTCAAACTGTTGATGAGGATCTCAGAGAACTGCACCCAGTATGCACTGTCTATCCTGTGGTCTGTCTGCAAGCTTGCGCCGGAGGAATGCTCGTCTGTCGCGGTGGATGCAGGGCTTGCCGCGAAACTCCTCCTTGTGATTCAGAGTGGTTGCAATCCTATATTGAAACAACAGTCTGCTGAGCTTTTGAAGCTGTGTAGTTTAAATTATTCAGATACCATTTTCATTTCAAAGTGCAAGCTTACAAGAACCATCCAATGA 1353 0.4789 MPMFQPCKRDMVAGFEGGGDGQILDLDTAVKDGVLGGVEGGVVGTGGVCEKLDLRKMIEELDLSEVPTVFICPISLEPMQDPVTLCTGQTYERSNILKWFNLGHFTCPTTMQELWDESVTPNTTLYRLIYTWFSQKYLLMKKRSEDVQGRASELLETLKKVKGQARVQALKELHQVVAAHATARKTLIDEGGVSVMSSLLGHFTSHAVGSEVIGILVCLTLDSESKKNLMQPAKISLMVDILNEGSIETKINCTRLIESLIDEEDFRSEVISSHSLLVGLMRLVKDKRHSNGICPGLSLLRAICLHKEVRNLLVSIGAVSQLVKLLSGLEPDCLELALCVLDALASIPEGRVALKDCPNTIPIMVKLLMRISENCTQYALSILWSVCKLAPEECSSVAVDAGLAAKLLLVIQSGCNPILKQQSAELLKLCSLNYSDTIFISKCKLTRTIQ* 451
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev05g0744 450 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 65 138 IPR013083 -
Aev05g0744 450 PANTHER U-BOX DOMAIN-CONTAINING PROTEIN 30 39 449 - -
Aev05g0744 450 Pfam U-box domain 66 136 IPR003613 GO:0004842|GO:0016567
Aev05g0744 450 SUPERFAMILY RING/U-box 60 136 - -
Aev05g0744 450 SUPERFAMILY ARM repeat 153 435 IPR016024 -
Aev05g0744 450 ProSiteProfiles U-box domain profile. 65 139 IPR003613 GO:0004842|GO:0016567
Aev05g0744 450 Gene3D - 139 443 IPR011989 -
Aev05g0744 450 PANTHER WDSAM1 PROTEIN 39 449 IPR045185 GO:0061630
Aev05g0744 450 SMART Ubox_2 69 132 IPR003613 GO:0004842|GO:0016567
Aev05g0744 450 CDD RING-Ubox_PUB 70 112 IPR045210 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev05g0744 Aev-Chr5 5178685 5180037 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev05g0744 1 450 U-box Gene Family AT3G49810 76.000 0.0 677
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev05g0744 - - gmx:100779827 798.119