Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev05g0735 ATGGGTGCTCCTAAGCAGAAATGGACTGCAGAAGAAGAAGCAGCGCTGAAGGCTGGAGTAGTCAAACACGGGGCTGGAAAATGGCGCACTATACTTACAGACCCAGAGTTCAGTGCCGTGTTGCGCATGCGTTCGAATGTAGATCTTAAGGACAAATGGAGGAATATAAATGTGACAGCAATATGGGGATCCAGGCAGAAGGCAAAGCTTGCCCTTAAAAAGAACCTACCACCCCCCAAAATCGACAATAACCACCCGGCCTTAAGTAATGTAGCTCAACGTGATGGAGTTGCTGACACTAAGGCTCTAGCAATTTCTGGTGGAGCATTGCAATCTCCTAATTCAAAAGAACAAATATCAAGTGGCAGGTTGGATAATCTCATATTAGAGTCGATTATCAAGTTAAAGGAGCCTAAAGGTTCTGACCGGGCTGCCATTGCTGCATATATAGAGGATCAATACTCATGTCCACCGAACCTCAGAAAGTTACTGTCAGCAAAACTGAAGCATATGGTGGCAACTGGCAAATTAATGAAGGTAAAGCATAAGTACAGGATTACAATAAATTCAATAAACTCTGAGAAGAGAAGAAGCTCTTCTCAGATACTCCAAGAAGGGAAGCCAAAAGACTCCCCAAAAGCACAGAAGACTGATGTCGGCATCCTATCAAAATCCCAAATTGATGCAGAGCTATCGAAAATGAAGGGTGTGACAGCTCAAGAGGCAGCAGCAGCGGCTGCAAAAGCAGTTGCAGAAGCAGAAGCTGCCATTGCTGAGGCTGAGGCAGCAGCTAGGGAGGCAGAGGCTGCAGAAGCCGAAGCAGAGGCTGCACGAGTATTTGCAAAAGCAGCAATGAAAGCACTAAAATGCAAAGCACTTCATATTTGGTAG 891 0.4557 MGAPKQKWTAEEEAALKAGVVKHGAGKWRTILTDPEFSAVLRMRSNVDLKDKWRNINVTAIWGSRQKAKLALKKNLPPPKIDNNHPALSNVAQRDGVADTKALAISGGALQSPNSKEQISSGRLDNLILESIIKLKEPKGSDRAAIAAYIEDQYSCPPNLRKLLSAKLKHMVATGKLMKVKHKYRITINSINSEKRRSSSQILQEGKPKDSPKAQKTDVGILSKSQIDAELSKMKGVTAQEAAAAAAKAVAEAEAAIAEAEAAAREAEAAEAEAEAARVFAKAAMKALKCKALHIW* 297
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev05g0735 296 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 1 61 IPR017930 -
Aev05g0735 296 MobiDBLite consensus disorder prediction 195 217 - -
Aev05g0735 296 SMART h15plus2 118 183 IPR005818 GO:0000786|GO:0003677|GO:0006334
Aev05g0735 296 SUPERFAMILY Homeodomain-like 2 66 IPR009057 -
Aev05g0735 296 SMART sant 4 59 IPR001005 -
Aev05g0735 296 CDD SANT_TRF 6 57 - -
Aev05g0735 296 Pfam Myb-like DNA-binding domain 5 56 IPR001005 -
Aev05g0735 296 ProSiteProfiles Linker histone H1/H5 globular (H15) domain profile. 120 188 IPR005818 GO:0000786|GO:0003677|GO:0006334
Aev05g0735 296 PANTHER SINGLE MYB HISTONE 4 1 295 IPR044597 GO:0003691
Aev05g0735 296 ProSiteProfiles Myb-like domain profile. 5 57 IPR001005 -
Aev05g0735 296 Gene3D - 2 59 - -
Aev05g0735 296 PANTHER MYB TRANSCRIPTION FACTOR 1 295 - -
Aev05g0735 296 Gene3D - 116 216 IPR036388 -
Aev05g0735 296 Coils Coil 243 277 - -
Aev05g0735 296 SUPERFAMILY "Winged helix" DNA-binding domain 121 197 IPR036390 -
Aev05g0735 296 Pfam linker histone H1 and H5 family 125 182 IPR005818 GO:0000786|GO:0003677|GO:0006334
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev05g0735 Aev-Chr5 5124453 5126802 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev05g0735 1 296 Single Myb Histone (SMH) Gene Family AT5G67580 55.150 1.12e-80 244
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Aev05g0735 Linker_histone 5e-11 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev05g0735 K09422 - gmx:100796539 375.17
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev05g0735 05 5124453 5126802 Aev01g0492 01 4448124 4451292 PCT