Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev05g0715 ATGACGCAATTCACACCAACACTACCATCTTTGCATCATCACCACCACCAAACCACACACCACTTTTCCAACCCTAGCGTTGGCGTCGTGATGAACGAGAACCAAATCCCTAGGAGTAGGCCCTGGCCTGGCTTGTTCCCTACCCCTAAGACCCTAGGCAACACCTTCGGTGACGCCACTTGCATGGAGCAGTTACTCGTCCACTGCGCAAACGCCATCGAAACCAACGACGTAACTCTGGCGCAACAAATCCTGTGGGTCCTCAACAACATAGCTCCCCCTGACGGCGACTCCAACCAACGCCTCGCCGGAAGCTTCCTCAGGGCCCTAACAACCCGCGCCGCACAATCCGGAAGCTGTTGCAAGATGCTCGCGGCCGTTGCAACCGCTCACCACAACAACCTCGCCACGATCGAGACGCACAAATTCTCTGTCATCGAGCTGGCCAATTTCGTTGACCTGACACCCTGGCACCGGTTCGGTTTCACAGCGGCCAACGCCGCGATTCTAGAAGCTACCGAAGGGTTCTCCGTCATCCACATCGTGGACTTGAGCCTTACGCACTGCATGCAGATCCCGACACTGATCGATGCCATAGCCAGCCGCCACGTGGTGCCACCTGTCATCAAGCTCACCGTGCCCGGTGCTGCCTCCAGGGACAATCATATCAACATCCCTCCCATGCTCGACCTCTCCTACGAGCAATTGGGCGCAAAATTGGTCAATTTCGCAAGGTCCAAGAACGTCGCCATGGAATTCAGGGTCGTTTCTTCCACCTACTCAGACGGTTTCTCGGCTTTGATTGAACACTTGCGGGTGCAACATATAGTCCACGTAGCGGAAGGTCGACCAAATGAAGCTCTGGTTGTGAACTGCCAAATGATGCTTCATTACATTCCGGACGAAACTGCACTATCACCGGAAACAGATTCGAAGAACCCTTATAGTAATAATAATAATGTTTATCACGATTACAACTCCTCTTCTTGTTCAGCTTCCGTTGGAGCTGGCAATTCGACGTCGTTTCGATCAATGTTTCTCAAGGCAGTGCGGAGCTTAGACCCAACGATTGTGGTTTTGGTGGATGAGGATGCGGATTTGACGTCTAATAACTTGGTGTGTAGGCTAAGATCTGCGTTTAATTACCTGTGGATACCGTACGACACGGTGGACACGTTCCTTCCGAGAGGGAGCAAGCAGAGGCAGTGGTACGAAGCTGATATATGCTGGAAGATTGAGAATGTGATAGCGCATGAAGGGATTCGGAGGGTTGAGAGGGTTGAGCCGAAGAGCAAGTGGGAGCAGCGGATGAGGAATGCGAGCTTTCATGGGATTGGTTTCAGTGAGGATTCGCTTTCGGAGGTGAAGGCCATGCTTGATGAGCATGCTGCTGGGTGGGGATTGAAGAGAGAAGATCACCAACTTGTGCTCACCTGGAAAGGCCACAATGTCATCTTTGCCTCTCTTTGGTTACCAGCTTGA 1482 0.5236 MTQFTPTLPSLHHHHHQTTHHFSNPSVGVVMNENQIPRSRPWPGLFPTPKTLGNTFGDATCMEQLLVHCANAIETNDVTLAQQILWVLNNIAPPDGDSNQRLAGSFLRALTTRAAQSGSCCKMLAAVATAHHNNLATIETHKFSVIELANFVDLTPWHRFGFTAANAAILEATEGFSVIHIVDLSLTHCMQIPTLIDAIASRHVVPPVIKLTVPGAASRDNHINIPPMLDLSYEQLGAKLVNFARSKNVAMEFRVVSSTYSDGFSALIEHLRVQHIVHVAEGRPNEALVVNCQMMLHYIPDETALSPETDSKNPYSNNNNVYHDYNSSSCSASVGAGNSTSFRSMFLKAVRSLDPTIVVLVDEDADLTSNNLVCRLRSAFNYLWIPYDTVDTFLPRGSKQRQWYEADICWKIENVIAHEGIRRVERVEPKSKWEQRMRNASFHGIGFSEDSLSEVKAMLDEHAAGWGLKREDHQLVLTWKGHNVIFASLWLPA* 494
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev05g0715 493 ProSiteProfiles GRAS family profile. 53 491 IPR005202 -
Aev05g0715 493 Pfam GRAS domain family 62 490 IPR005202 -
Aev05g0715 493 PANTHER SCARECROW-LIKE PROTEIN 32 32 491 - -
Aev05g0715 493 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 32 491 IPR005202 -
Aev05g0715 493 MobiDBLite consensus disorder prediction 1 26 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev05g0715 Aev-Chr5 4950463 4951944 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev05g0715 43 492 GRAS Transcription Factor Family AT3G49950 55.727 2.49e-170 484
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Aev05g0715 GRAS 2.2e-91 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev05g0715 - - adu:107487668 747.658
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev05g0715 05 4950463 4951944 Aev05g0715 05 4950463 4951944 ECH