Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev05g0678 ATGTTTACAGTGGCATTCTGTGCAAAAGGGGGAAAACTGATGGAGAAAATGCCTGGGATCGAAGAAGGTGCTGAGCCACCGGCTTCATCTACACCAGATGATGTGCCGGCCAATACGGAAATACAACAAGTTGCTCCTACTAAGTACTCTGTTATCAGTAGGGAGGGGGTTGGGACCACAGGAAAGCGCATAGCATTGCTTGCCAATCACTTCAAAGTGGACTTCTCCGTTCTAGATGCGATATTTTTTCAGTATAATGTTACTATTTCTTCGGAAGATAAAAGAATTGTTGAAAGCAAGGGCATTGGGAGAAAATTGATTGATAGGCTTTATCAAACATATTCCTCTGAACTAGGTGGCAAAAGGTTTGCCTATGATGGAGAGAGAACTTTGTACACTCTGGGTCCTCTGCCACATAATAAGTTTGAATTCAAAGTATTGCTTGAAGAATCTTATGCAAAGCATGGTGCTGATGCTCCTGATGCAAATGGAAGCCCTCATGAAAAGACTAAAAGGTCAAAACATTCTTTTCAGTCAAAGACATTCATGGTGGAGATAAGTTTTACTTCCAAAATACCACTGCAGTCTGTTGATCTTTCCCTCGGAGGGGTTGAGTCAGATGCTAAGTATCAGGATGCTTTGAGAGTGCTTGATACTATACTGAGGCAGCAAGCAGCTAACAGAGGGTGTCTTTTGGTAAGGCAGTCTTTTTTTCATGATGACTCAAGGAATTCCATCGATGTTGGGGGTGGAGTAATGGGAGTTCAGGGTTTTCATTCTAGTTTTCGTCCCATGCAGGGTGGATTGTCTCTCAATATGGATGTGTCCACAATTGTGATCTTAAAACCTGGACCTGTAATTGATTTTCTACTATCTAACCAGAATGTGAAGGAACCCCGTTATATTGACTGGGCAAAGGCCAAAAAAGTGCTTAAAAATTTAAGGGTGTATGCATCACATCGTAACCAGGAATTTAAAATTTCTGGCTTGAGTGAGAAACCCTGCATTCAGCAGCTTTTTAGTATGAAGGAAAGAAATGGTGACATTGAGAATGAAGGGCAGACAGTCGATATTACCGTATATGAGTATTTTGCTAAACAGTATGGCATAGAGCTGACCTCTTCTGCTTATCTTCCATGCCTTGATGTTGGGAAGCCAAAACGGCCCATCTACCTGCCTCTGGAGCTATGTTCACTTGTTTCACTTCAGCGGTATATAAAGGCATTATCTCCAATACAAAGGGCATCTTTACTTGAAAAATCACGCCAAAAGCCTCAAGAAAAGATTAAAATTCTGACAAATGCTGTCAGAAATTGTTGCTATGAAGAAGACCCTGTTCTAGCTGCATGTGGGATTTCTATTGAGAAACAATTGACTCAGGTTGAAGGTCGAGTTCTTGAGGCACCAAAGTTGAAGGTTGGTGAGAATGACGACTGCTTCCCCCTTAATGGAAGGTGGAGCTTTAATAAAAAGACACTTCTACAACCATCACATATTGATTTCTGGGCTGTTGTCAATTTCTCTGCTCGTGGTGATACTAGTTCCTTATCGAGGGAGCTGATCAAATGTGGAATGAGCAAGGGCATGAACATTGAGCGTCCATATACTTTAATAGAGGAAGAACCACAGTTGAGAAAATCTAGCCCTGTTGCAAGGGTTGAAAGGATGTTTGAGCGACTTACATCAAAACTTATAAAAGAACCAAAGTTAATTCTGTGTGTCTTGCCAGAGAGGAAAAATTGTGACATTTATGGGCCCTGGAAGAAGAAGTGCCTAAGTGAGTTTGGTGTTGTCACACAATGCATTTGTCCTCTGAAGATTACTGATCAATACCTTACTAATGTACTTCTTAAAATCAATTCTAAGCTTGGTGGAACAAATTCTTTGCTGGCAATGGAGCATTCTGGGCATCTTCCTCTGATTAAAGACACCCCAACAATGATTTTGGGTCTAGATGTCTCTCATGGCCCCCCTGGTCAGTCAGATATTCCATCAATAGCAGCGGTGGTTGGATCACGATGTTGGCCACTGATTTCAAGGTATAGAGCATCTGTAAGAACACAGTCATCTAAGGAGGAGATGATTCATACTCTGTACAAGCCTTTGGATCATGAGAATGGTGATGGTATTTTAAAAACAAAGATGGATGATGGTATTATCAGAGAGTTACTTCTTGAATTCTATGGATCAAGTAATAATTGCAAACCAACTCAAATTATTGTCTTCAGGGATGGAGTTAGTGAATCACAATTTAATCAGGTTTTAAATATTGAGCTTGACCATATTAGAAAGGCCTATCAGCTTCTTGAGGAGGTTATTGTTCCTAAGTTTACTGTAATTGTGGCACAAAAGAATCACCGTACAAAACTGTTCCAAGCAAATGGTCCAGAAAATGTTCCTCCTGGGACCGTTGTTGACACAAAAATCATACATCCAAGGAATTATGATTTCTACATGTGTGCTCATGCAGGGAAGCTTGGAACATCCAGGCCTGTTCATTATCATGTGTTACTTGATGAGATCGGTTTCTCAGCCGATGGCTTGCAAAATTTGATCCATTCGCTGTCGTATGCGAATCAAAGGAGCACAAATGCAACCTCACTTGTGGCACCTATATGCTATGCCCACCATGCTGCAGCCCAGATGGGGAGAATGTTGAATTGTGATGATTTATCAGAAACACCTTCAGATGTTGCTTCAGAGGGAGGAAGCATCCAAATCCCCGAGCTTCCGAGATTGCACAAGAATATCAGGAGTACCATGTTCTTCTGTTAA 2775 0.4126 MFTVAFCAKGGKLMEKMPGIEEGAEPPASSTPDDVPANTEIQQVAPTKYSVISREGVGTTGKRIALLANHFKVDFSVLDAIFFQYNVTISSEDKRIVESKGIGRKLIDRLYQTYSSELGGKRFAYDGERTLYTLGPLPHNKFEFKVLLEESYAKHGADAPDANGSPHEKTKRSKHSFQSKTFMVEISFTSKIPLQSVDLSLGGVESDAKYQDALRVLDTILRQQAANRGCLLVRQSFFHDDSRNSIDVGGGVMGVQGFHSSFRPMQGGLSLNMDVSTIVILKPGPVIDFLLSNQNVKEPRYIDWAKAKKVLKNLRVYASHRNQEFKISGLSEKPCIQQLFSMKERNGDIENEGQTVDITVYEYFAKQYGIELTSSAYLPCLDVGKPKRPIYLPLELCSLVSLQRYIKALSPIQRASLLEKSRQKPQEKIKILTNAVRNCCYEEDPVLAACGISIEKQLTQVEGRVLEAPKLKVGENDDCFPLNGRWSFNKKTLLQPSHIDFWAVVNFSARGDTSSLSRELIKCGMSKGMNIERPYTLIEEEPQLRKSSPVARVERMFERLTSKLIKEPKLILCVLPERKNCDIYGPWKKKCLSEFGVVTQCICPLKITDQYLTNVLLKINSKLGGTNSLLAMEHSGHLPLIKDTPTMILGLDVSHGPPGQSDIPSIAAVVGSRCWPLISRYRASVRTQSSKEEMIHTLYKPLDHENGDGILKTKMDDGIIRELLLEFYGSSNNCKPTQIIVFRDGVSESQFNQVLNIELDHIRKAYQLLEEVIVPKFTVIVAQKNHRTKLFQANGPENVPPGTVVDTKIIHPRNYDFYMCAHAGKLGTSRPVHYHVLLDEIGFSADGLQNLIHSLSYANQRSTNATSLVAPICYAHHAAAQMGRMLNCDDLSETPSDVASEGGSIQIPELPRLHKNIRSTMFFC* 925
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev05g0678 924 Gene3D - 465 631 - -
Aev05g0678 924 SMART DUF1785_2 231 283 IPR014811 -
Aev05g0678 924 MobiDBLite consensus disorder prediction 157 176 - -
Aev05g0678 924 Pfam Piwi domain 570 886 IPR003165 GO:0003676
Aev05g0678 924 Gene3D - 637 924 IPR036397 GO:0003676
Aev05g0678 924 Pfam N-terminal domain of argonaute 62 221 IPR032474 -
Aev05g0678 924 Pfam Argonaute linker 1 domain 233 279 IPR014811 -
Aev05g0678 924 SMART PAZ_2_a_3 284 423 IPR003100 GO:0005515
Aev05g0678 924 Gene3D paz domain 278 406 - -
Aev05g0678 924 ProSiteProfiles PAZ domain profile. 308 401 IPR003100 GO:0005515
Aev05g0678 924 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 2C 44 923 - -
Aev05g0678 924 MobiDBLite consensus disorder prediction 157 172 - -
Aev05g0678 924 SMART Piwi_a_2 570 887 IPR003165 GO:0003676
Aev05g0678 924 CDD Piwi_ago-like 445 881 IPR045246 -
Aev05g0678 924 SUPERFAMILY PAZ domain 280 440 IPR036085 GO:0005515
Aev05g0678 924 Pfam Argonaute linker 2 domain 430 472 IPR032472 -
Aev05g0678 924 CDD PAZ_argonaute_like 283 400 - -
Aev05g0678 924 PANTHER PROTEIN ARGONAUTE 6 44 923 - -
Aev05g0678 924 SUPERFAMILY Ribonuclease H-like 566 885 IPR012337 -
Aev05g0678 924 Pfam PAZ domain 287 417 IPR003100 GO:0005515
Aev05g0678 924 ProSiteProfiles Piwi domain profile. 570 887 IPR003165 GO:0003676
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev05g0678 Aev-Chr5 4701834 4707960 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev05g0678 35 924 Eukaryotic Initiation Factors Gene Family AT5G43810 35.961 2.43e-166 509
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev05g0678 K11593 - gmx:100778875 1408.28