Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev05g0665 ATGTGGGATCTGAATGACTCCCCTGACCAGAGGAAGGACTACGAATCCGAAGGGTGTTCTTCCCTCAAAACATCCATGGATGTTGACGATGACAACAAAGGCAAGCGGGTCGGATCTCTCTCCAATTCGAGCTCCTCCGCGGTGGTCGTAGAAGACGGATCCGAAGTAGACGAAGAAGAAGAAGAAGAAGAAGAAGACGAAGAATTAGAATTAGAAGTAGAAGAAGAAGACGAAAACAACAACAACAACACCATCAGAGCTTCCTCGATGATGATGATGAAGAAAAGAAGCAGCAAGATATTCGGGTTCTCCGTCACCCACCACGCTGACCACTCCATGGACAGCGAAAGCAATCCCCCCGTGACCCGCCAGTTTTTCCCGGTGGAGGACTCCGATATGCCCACATCGGCCTCCGGCAGTGGCGGTAGTGGTGGTTGTGCAGGAGCAGGAGGAGGAGGCTCTTCCTTCCCACGAGCTCACTGGGTAGGAGTGAAGTTCTGCCAATCGGAAGCACTGGGTGGAGGGAAATCAGTGGAAGTTTCTCAGCCTATGAAGAAGAGTAGAAGAGGACCAAGGTCTAGAAGCTCGCAGTATAGAGGAGTTACCTTCTACAGAAGAACCGGTCGATGGGAGTCTCATATTTGGGATTGTGGAAAACAGGTGTATCTGGGTGGATTTGACACAGCACATGCAGCTGCTCGTGCGTATGACAGAGCGGCAATTAAGTTCCGGGGAGTGGAGGCAGACATAAACTTCAACATTGAAGATTATGAAGAAGACTTGAAACAGATGAGCAATCTAACCAAGGAAGAGTTTGTTCACGTACTTCGCCGACAAAGCACTGGGTTCCCAAGAGGAAGCTCTAAATATAGAGGTGTTACTTTGCACAAGTGTGGCAGATGGGAGGCTCGTATGGGCCAATTTTTGGGCAAAAAGTACGTTTATTTGGGTCTGTTTGACACCGAGATTGAAGCTGCAAGGGCTTATGACAAAGCGGCAATCAAATGCAACGGCAAAGAGGCCGTTACCAATTTTGATCCCAGCATCTATGAAAACGAGCTTAATTCTGAATCCTCAGGTAATGCCGCTGGTGGTGCTGCCGCAGCAGCAGATCACAATCTGGATCTGAGTCTGGGCAATCCAAGTTCAAAGCACACAAATAATCAATCACTAGGGAATCATCATCACACCCTAAATGCTCCAAGTGAATCCAATTGGCGTAACGGGGGAAGCAAACCTAACAAGCTGGTGAATATTCTACCAAAACCAAGTAGTAGAAGCAACATGGAGGGGCATAGGGGGGAGAGTGAGCCAGCCTTGAGGCTGCATCATTTTCAATCTCCACCCTCTACTAATGAACTCATAATGCATAGATACGGCGGTCCATACCGGTCCGGAGACCCTCAAATGCTCCACACTTTTCCACATCTTCATCCACCCAATTTTCATCATTTTCCGATAACCAGCAGCAGCAGCAATGGAGGCCGAATTGGAAGTGACGTTTCGATAATAATGAGCGATCAACAACAACAACAGTGGCAAAACGGGCCTCCTCCTCATTCGTTAGCAACTGCCGCTGCAGCATCATCAGGATTCCCACCACAGATTAGACCCTCCCAAGCTTGGCTGCAGAAAAATGGCTTCCACCCTAGTCTCATGAGACCCTCTTGA 1671 0.4871 MWDLNDSPDQRKDYESEGCSSLKTSMDVDDDNKGKRVGSLSNSSSSAVVVEDGSEVDEEEEEEEEDEELELEVEEEDENNNNNTIRASSMMMMKKRSSKIFGFSVTHHADHSMDSESNPPVTRQFFPVEDSDMPTSASGSGGSGGCAGAGGGGSSFPRAHWVGVKFCQSEALGGGKSVEVSQPMKKSRRGPRSRSSQYRGVTFYRRTGRWESHIWDCGKQVYLGGFDTAHAAARAYDRAAIKFRGVEADINFNIEDYEEDLKQMSNLTKEEFVHVLRRQSTGFPRGSSKYRGVTLHKCGRWEARMGQFLGKKYVYLGLFDTEIEAARAYDKAAIKCNGKEAVTNFDPSIYENELNSESSGNAAGGAAAAADHNLDLSLGNPSSKHTNNQSLGNHHHTLNAPSESNWRNGGSKPNKLVNILPKPSSRSNMEGHRGESEPALRLHHFQSPPSTNELIMHRYGGPYRSGDPQMLHTFPHLHPPNFHHFPITSSSSNGGRIGSDVSIIMSDQQQQQWQNGPPPHSLATAAAASSGFPPQIRPSQAWLQKNGFHPSLMRPS* 557
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev05g0665 556 MobiDBLite consensus disorder prediction 52 78 - -
Aev05g0665 556 MobiDBLite consensus disorder prediction 374 439 - -
Aev05g0665 556 MobiDBLite consensus disorder prediction 376 425 - -
Aev05g0665 556 SUPERFAMILY DNA-binding domain 196 254 IPR016177 GO:0003677
Aev05g0665 556 ProSiteProfiles AP2/ERF domain profile. 289 346 IPR001471 GO:0003700|GO:0006355
Aev05g0665 556 Coils Coil 56 81 - -
Aev05g0665 556 MobiDBLite consensus disorder prediction 1 87 - -
Aev05g0665 556 SUPERFAMILY DNA-binding domain 288 348 IPR016177 GO:0003677
Aev05g0665 556 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 1 553 - -
Aev05g0665 556 MobiDBLite consensus disorder prediction 177 197 - -
Aev05g0665 556 PANTHER AP2 DOMAIN TRANSCRIPTION FACTOR 1 553 - -
Aev05g0665 556 SMART rav1_2 197 259 IPR001471 GO:0003700|GO:0006355
Aev05g0665 556 SMART rav1_2 289 352 IPR001471 GO:0003700|GO:0006355
Aev05g0665 556 CDD AP2 288 348 IPR001471 GO:0003700|GO:0006355
Aev05g0665 556 Pfam AP2 domain 288 337 IPR001471 GO:0003700|GO:0006355
Aev05g0665 556 Pfam AP2 domain 197 245 IPR001471 GO:0003700|GO:0006355
Aev05g0665 556 MobiDBLite consensus disorder prediction 1 36 - -
Aev05g0665 556 ProSiteProfiles AP2/ERF domain profile. 197 253 IPR001471 GO:0003700|GO:0006355
Aev05g0665 556 PRINTS Ethylene responsive element binding protein signature 290 301 IPR001471 GO:0003700|GO:0006355
Aev05g0665 556 PRINTS Ethylene responsive element binding protein signature 328 348 IPR001471 GO:0003700|GO:0006355
Aev05g0665 556 MobiDBLite consensus disorder prediction 130 151 - -
Aev05g0665 556 Gene3D AP2/ERF domain 288 347 IPR036955 GO:0003700|GO:0006355
Aev05g0665 556 Gene3D AP2/ERF domain 196 255 IPR036955 GO:0003700|GO:0006355
Aev05g0665 556 MobiDBLite consensus disorder prediction 507 538 - -
Aev05g0665 556 CDD AP2 197 254 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev05g0665 Aev-Chr5 4624190 4627340 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev05g0665 1 385 AP2-EREBP Transcription Factor Family AT4G36920 62.563 1.00e-132 392
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-AP2 Aev05g0665 AP2 3.9e-10 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev05g0665 K09284 - gmx:100786333 644.81
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev05g0665 05 4624190 4627340 Aev05g0665 05 4624190 4627340 ECH
Aev05g0665 05 4624190 4627340 Aev01g0548 01 4986655 4991790 PCT