Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev05g0655 ATGGGGGATGATATGTACAACTATGACAAGAATCTCTCCTCGTCCTCTTCCTCACAGGACGAAATCTCCCTTTTTCTGCGTCAGATTCTGCTCCGTTCATCCTCTTCACCAGCATCTTCTTCCCAACCACACAACAACAATAACAGTAACTTCATGCCTTTTGAAAATGCAAACCCTTCATCTTTACACCTTCATGATGGGAAGATCTCACCCCTTGGTTCCACCCAGGGTTTTCTCTCTGCCTCGGCGCCTTATGCTGCTTCCATGAAGGGGCAGGGTCCCTGTTCTGCTGCAAATGTCTCTTCTTCTTCCTTGGGAGTGAGTGAGAACGACACTGATGAATATGATTGTGAAAGTGAGGAGGGTATTGAAGCATTGGCAGAAGAAGTTCCAACAAAACCTGTTCCTTCTAGGAGCTCATCGAAAAGAAGCAGAGCAGCAGAAGTTCATAATTTGTCTGAAAAGCGAAGAAGGAGTAGGATCAATGAAAAAATGAAGGCTTTGCAGAATCTTATTCCAAATTCTAACAAGACTGATAAAGCTTCAATGCTGGATGAAGCTATTGAATACCTTAAACAGCTTCAGCTCCAAGTACAGATGCTGTCAATGAGAAATGGACTGAGTTTGCATCCTATGTGCTTTCCTGAAGGATTGCAGTCTCTGCAATTCTCTCGGATGAGTATGGATTTAAGTGAAGAAAACAGGGCTATCCCTTTAAACATGTCAGATACTCTGCCTCTGCACCAAGGGAACCCTTTGCATTATACATCCAATTTACCTAACAAATCCACTACTGTGCCGAATCAGCCATCTGTGACTTACCCTTCATATCTTAACAACAACTCAGAAACTTCTTTTGGGCTGGAATCCCCAATCCTAGCACAAATGAAGCCTCTTCAACCCGGAAGGTCTTCTGAGACTCGTAGAGAAGACATATTGCAGCACCAGCAAGTGAATGCAAGCCAATCAGATACCAATCCATTAGGATGTTCTCAAGTTGTGAAAGAGTTGGCGTCAGGAACCTTGGCTGCGGCGCCGCTATCGTTTGACATGCAAACAACTGAAGCTAATAAGGATAATAGCAGTTTGCAAACATGCATTGCCGGAATAGATCAATCAGCAGTGATCATAAGAAATAGTTAG 1143 0.4357 MGDDMYNYDKNLSSSSSSQDEISLFLRQILLRSSSSPASSSQPHNNNNSNFMPFENANPSSLHLHDGKISPLGSTQGFLSASAPYAASMKGQGPCSAANVSSSSLGVSENDTDEYDCESEEGIEALAEEVPTKPVPSRSSSKRSRAAEVHNLSEKRRRSRINEKMKALQNLIPNSNKTDKASMLDEAIEYLKQLQLQVQMLSMRNGLSLHPMCFPEGLQSLQFSRMSMDLSEENRAIPLNMSDTLPLHQGNPLHYTSNLPNKSTTVPNQPSVTYPSYLNNNSETSFGLESPILAQMKPLQPGRSSETRREDILQHQQVNASQSDTNPLGCSQVVKELASGTLAAAPLSFDMQTTEANKDNSSLQTCIAGIDQSAVIIRNS* 381
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev05g0655 380 MobiDBLite consensus disorder prediction 89 157 - -
Aev05g0655 380 PANTHER TRANSCRIPTION FACTOR PIF1-RELATED 13 326 IPR031066 -
Aev05g0655 380 MobiDBLite consensus disorder prediction 34 57 - -
Aev05g0655 380 CDD bHLH_AtPIF_like 146 207 - -
Aev05g0655 380 Pfam Helix-loop-helix DNA-binding domain 149 195 IPR011598 GO:0046983
Aev05g0655 380 MobiDBLite consensus disorder prediction 34 69 - -
Aev05g0655 380 MobiDBLite consensus disorder prediction 111 125 - -
Aev05g0655 380 SMART finulus 151 200 IPR011598 GO:0046983
Aev05g0655 380 MobiDBLite consensus disorder prediction 143 157 - -
Aev05g0655 380 Coils Coil 184 204 - -
Aev05g0655 380 MobiDBLite consensus disorder prediction 94 110 - -
Aev05g0655 380 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 142 205 IPR036638 GO:0046983
Aev05g0655 380 PANTHER TRANSCRIPTION FACTOR SPATULA 13 326 - -
Aev05g0655 380 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 145 194 IPR011598 GO:0046983
Aev05g0655 380 Gene3D - 139 204 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev05g0655 Aev-Chr5 4547877 4550633 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev05g0655 9 329 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G36930 41.834 2.79e-50 171
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Aev05g0655 HLH 7.5e-14 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev05g0655 - - gmx:100793754 412.149
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev05g0655 05 4547877 4550633 Aev05g0655 05 4547877 4550633 ECH