Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev05g0653 ATGGGAGATGAAGAGGGTGCAGCCACAACCGCCAGCGGAAGGCGAAGGACCAGAGGTCCGGTCCCCTCTTCGCGCGCCGAAGCCCTCGAGCGCCTCAAACAGCGCCGCTCCGGTCACCGATCCGACGGCGCCTCCCCTCAAATCCGCCTAGAAAACCCTATCTACGACACCGTTCCTGAGGACGAGTACAACGCCCTCGTTGCCAAGCGCCGCGAGGAGGCTCGCTCCTTCATTGTCGATGACGATGGCCTCGGCTATGGCGACGAGGGCGAGGAAGAGGACTGGTCCAAAGCCGGCTTCTCCCTCTCCTCTGAAGAATCCGATGGCGGTGAAGACAAGCCCAAGCGCAAGAAGGCTGAGAAGAAGGAGAATCCTCAGCAGAAACGCACTTCAGCTTCGCTCTCCGCCGCAGCGGCCATGATTGGCGCGCAGAGGCTGTCGTCGATGTTCACGTCGTCGGTGTTCAAGAAGAGCAGGGATGATAGGGCTTCTGAAAGCATCGTCGACGATGTTCTCGCGGAATTCGCGCCCGACGAGAGTGATAGGGAGAGGCGTAGAAGAGGACAAGCGAAATCGATTCCGAGTTCAAATTCAAAGAATGACGCTCTTCGGGTTAACATCGTTTCCGGTAACGATTCATCCATTGGTGCAACTGTTGATCTGATGAAATGTTCTTCGTTGTTTGGAGCGGTTGGAAATGAAGATGTTGAGTCGGTTAGGGTTTTTGGAAATGGCGGCAGCGATTTAGGTTCAGAGCTTAAGAGCGATGAAATTAGAGAGAATGCGTGTTCTAGTAAAGGTTCAGATGATGGAAAAGTTTTCGGTTCTGAAAATGGTCTCTCATCGAACGAGAAAGTGCAAACTAATGGAGATTTAGCTGAGGAAAAGGTGATGAAGGAGGAGGTTGAGGTAGAAGCAAAACCAGCTGCTACGAAGAAGGAAGTGTTTACCTTGAATGCGAAGGTGAAAGATGAAGTGAACCCAGCGATGAGTGCGACATTGGGATGGAAGGAGGCGAGGTGTGGTGGAGGGGAAATGAATGCTGCTGATTCTAAAACAGTGTTGAGGGATGCTTCCAATAAGGAAGAACATTCTGAGTTCAAGCTTGAGGCTGATGGGTCGCTTCCTTTCTATATTTTGGATGCACATGAAGAGTTTCAAGGAGCCAACAGGGGAACCCTTTACTTGTTTGGGAAGGTAAAAGCAGGGAATTCGTATCAGAGTTGTTGTGTGGTCGTGAAGAACGTGCAGAGATGTATCTATGCCATTCCAAGTCATCCTTTACAACACACTGATGAAATGATGAAGCTTGAGAAAGATGTCCAAGAGTCTCGGCTTTCTCCAGCCGATTTCCGCAGCAAGCTGCAAGATGCGGCGACGGGTTTAAAGAACGAGATTGCAAAACATTTGTTGGATTTGAATGTTTCGACCTTTAGCATGGCACCTGTTAAGAGGAAGTATGCATTTGAACGATCTGAAGTTCCCCCTGGTGAAAATTATGTGGTGAAAATCAATTACCCATTCAAGGATCCAGCACTTCCGATAGATCTCAAAGGAGAAAGTTTTTGTGCTCTATTAGGAACACAGTGCAGTGCGCTGGAGCTTTTTCTGATTAAAAGAAAGATAAAGGGACCTTCATGGCTACAGGTTTCAAACTTTTCTACCTGCTCAGCTTCTCAGAGGGTTAGCTGGTGCAAATTTGAGGTGACTGTCGACTCTCCAAAAGACATAAGGATTTCAACTTCATCAAAAATCACTTTTGAGATTCCTCCTGTGGTTGTTTCAGCAATAAATTTGAAAACCATCCTAAATGAAAAACAGAATGTGAATGAGATTGTATCTGCATCAATAATCTCCTGCAATATGGTTAAGATTGATGCTCCAATGTTGACTTCTGAGTGGAGGAGACCTGGAATGCTGACCCATTTTACTGTCATTCGTAAACTTGATGGACATATATTTCCGGTGGGGTTCAGTACGGAGGTTGCAGAAAGAAACAAAAAAGCTGGGTCAGTTGTTCTGGGTGTCGAAAGCAGTGAAAGAGCTTTGTTAAACCGCCTAATGGCAGAGTTTCACAAGTTGGACAGTGATGTTCTTGTTGGACATAATATTTCTGGATTTGACCTGGAAGTTATTCTCCACAGATGCCAGGCATGTAAGGTAGCGAGCAACATGTGGTCTAAATTAGGCCGCCTCAGACGTTCTGCCTTGCCTAAGCTTGATAGAGGAAGCAAAACTTTTGGTTCTGGAGCTCGTCCTGTTGTCATGTCTTGCATGGCTGGCAGGCTTCTTTGTGATACATACTTGTCTTCCCGTGACCTACTGAAAGAGGTTAGTTATTCGTTAACTGAACTGGCAAAAACACAGCTGAAAAAGTTTCGGACGGAAATTGCTCCACATGATGTTCCAAACAAGTTCCAATCAGCCGAATCCCTATTTGAGCTTATTGAATATGGTGAAACTGATGCTTGGCTGTCCATGGAGCTCATGTTTCATTTGAGTATTCTTCCCCTTACTCGTCAACTCACTAATATAAGTGGTAATCTTTGGGGGAAAACTCTTCAGGGTGCTCGGGCACAGAGAGTGGAGTATCTTTTGTTGCATGCTTTCCATGCTAAGAAATATATTGTGCCAGACAAGATTCCATACCATGTGAAAGAAACAAAATTGGTGAAACGCAAAGTAACTCAAGGTGTTGATGATAGCAACTTTGACGAAGCAGGAGTTGATGTGGCAAACTATGATAATGATGCTCCAGATGGTGATAATAAGAAAAGTAAAAAGGGTCCTTCTTATGCTGGAGGACTGGTTTTAGAGCCAAAGAAGGGTCTATACGACAAATATATATTACTCTTGGACTTCAATAGTCTTTATCCTTCTATCATTCAGGAATATAACATCTGTTTTACAACTGTTGAAAGATCTTCAGACGGATCATTTCCTCGTTTGCCATCTAGTAAAACAATTGGAGTTTTGCCCGAGTTGCTGCAAAATCTGGTTCAAAGGAGGAGAATGGTGAAGAAGTGGATGAAGTCCGCATCTGGTCTTAAATTTCAGCAGCTGGACATTCAGCAGCAAGCATTGAAGCTTACTGCAAACAGTATGTATGGATGCCTGGGATTTTCCAATTCAAGATTTTATGCTAAGCCACTTGCTGAACTTATAACCTTACAAGGCAGGGAGATACTGCAGAGTACCGTCGATCTTGTTCAGAATAACTTAAACTTAGAGGTGATCTATGGCGATACTGATTCAATAATGATATACAGTGGACTAGATGATATTGCAAAAGCAAAAGTAATGGCTAGCAAAGTTATTCAAGAGGTCAATAAGAAATACAGGTGCTTGGAAATTGATCTTGATGGTTTGTACAAGAGGATGCTACTTCTAAAGAAAAAGAAATATGCAGCTGTAAAGGTGCAGCTCAACGATGCCACGACATATGAGGTTATCGAGCGTAAAGGTCTTGATATTGTCCGGCGTGATTGGAGCTTATTAGCTAAAGAATTGGGAGATTTTTGCTTGAGTCAAATATTGTCAGGAGGGTCTTGTGAAGATGTTGTTGAATCAATTCACAGTTCTCTGATGAAGGTGCAAGAAGAAATGAGGAGCGGACAAGTAGCGCTAGAGAAGTATATCATCACTAAGACATTGACTAAACCTCCTGAGGCTTATCCTGATGCAAAAAACCAGCCACATGTTCTTGTGGCACAAAGATTGAAGCAACAAGGTTACTCCTCTGGTTGCTCTGTTGGTGATACAATCCCGTACATAATTTGCTGCGAGGAGGGCACTAGTTCAGGCAGTGCAACAGGCATTGCTCAGCGAGCAAGACATCCTGATGAACTGAAACGAGAGCAAGGGAAATGGCTTATTGACATTGAGTACTATTTGTCACAACAGATTCATCCAGTGGTATCACGTCTTTGTGCATCCATTCAGGGCACAAGCCCAGAAAGATTGGCTGATTGTTTAGGGCTTGACTCGTCAAAGTTCCAACATAAATCAATTGAATCTTCAAACAGTGATCCTTCAAGCTCGCTCTTGTTTGCTGCTGGTGATGAGGAGAGGTATCGGGGATGTGAGCCATTGGTGTTGTCGTGCCCCAGTTGCTGTGATACATTCGAGTGCCCTCCTGTTTTTAAATCTATTTGTATGTTGGAAAGTGAAAAGGCGGCCGCGGATGCAGAAGCCAAATACAATTTCTGGCGTAAGCTTCGGTGTCCTAAATGCCCAGAAGATGGTGCTCTCGGTAGAATATCTCCTCCAATGATAGCCAATCAGGTCAAAAGGCAGGCGGACAATTTTGTTTTGTTGTACTACAGAGGTTTACTAATGTGTGATGATGAAACGTGTAAGCATACAACGCGAAGTATCAGCTTTCGGTTGGTGGGTGATTCTGAGAGAGGAACTGTTTGTCCTAACTATCCTCGATGCAACGGCCGTCTCCATAGAAAGTACACTGAAGCAGACTTGTACAAGCAGCTCTCATATTTTTGCCATGTATTGGATACTGTTTGCGGTATAGACAAGGTGGAAACTAAATCTAGGATGTCGATTGAGAAAGAGTTGATAAAACTTAGGCCAATGATTGATCCAGCAGCATCCACAGTAGAGAAAATCAGAGACCGATGTGCCTATGGATGGGTGAAGCTACAGGATCTCGTCGTTACAGTTTAA 4680 0.4462 MGDEEGAATTASGRRRTRGPVPSSRAEALERLKQRRSGHRSDGASPQIRLENPIYDTVPEDEYNALVAKRREEARSFIVDDDGLGYGDEGEEEDWSKAGFSLSSEESDGGEDKPKRKKAEKKENPQQKRTSASLSAAAAMIGAQRLSSMFTSSVFKKSRDDRASESIVDDVLAEFAPDESDRERRRRGQAKSIPSSNSKNDALRVNIVSGNDSSIGATVDLMKCSSLFGAVGNEDVESVRVFGNGGSDLGSELKSDEIRENACSSKGSDDGKVFGSENGLSSNEKVQTNGDLAEEKVMKEEVEVEAKPAATKKEVFTLNAKVKDEVNPAMSATLGWKEARCGGGEMNAADSKTVLRDASNKEEHSEFKLEADGSLPFYILDAHEEFQGANRGTLYLFGKVKAGNSYQSCCVVVKNVQRCIYAIPSHPLQHTDEMMKLEKDVQESRLSPADFRSKLQDAATGLKNEIAKHLLDLNVSTFSMAPVKRKYAFERSEVPPGENYVVKINYPFKDPALPIDLKGESFCALLGTQCSALELFLIKRKIKGPSWLQVSNFSTCSASQRVSWCKFEVTVDSPKDIRISTSSKITFEIPPVVVSAINLKTILNEKQNVNEIVSASIISCNMVKIDAPMLTSEWRRPGMLTHFTVIRKLDGHIFPVGFSTEVAERNKKAGSVVLGVESSERALLNRLMAEFHKLDSDVLVGHNISGFDLEVILHRCQACKVASNMWSKLGRLRRSALPKLDRGSKTFGSGARPVVMSCMAGRLLCDTYLSSRDLLKEVSYSLTELAKTQLKKFRTEIAPHDVPNKFQSAESLFELIEYGETDAWLSMELMFHLSILPLTRQLTNISGNLWGKTLQGARAQRVEYLLLHAFHAKKYIVPDKIPYHVKETKLVKRKVTQGVDDSNFDEAGVDVANYDNDAPDGDNKKSKKGPSYAGGLVLEPKKGLYDKYILLLDFNSLYPSIIQEYNICFTTVERSSDGSFPRLPSSKTIGVLPELLQNLVQRRRMVKKWMKSASGLKFQQLDIQQQALKLTANSMYGCLGFSNSRFYAKPLAELITLQGREILQSTVDLVQNNLNLEVIYGDTDSIMIYSGLDDIAKAKVMASKVIQEVNKKYRCLEIDLDGLYKRMLLLKKKKYAAVKVQLNDATTYEVIERKGLDIVRRDWSLLAKELGDFCLSQILSGGSCEDVVESIHSSLMKVQEEMRSGQVALEKYIITKTLTKPPEAYPDAKNQPHVLVAQRLKQQGYSSGCSVGDTIPYIICCEEGTSSGSATGIAQRARHPDELKREQGKWLIDIEYYLSQQIHPVVSRLCASIQGTSPERLADCLGLDSSKFQHKSIESSNSDPSSSLLFAAGDEERYRGCEPLVLSCPSCCDTFECPPVFKSICMLESEKAAADAEAKYNFWRKLRCPKCPEDGALGRISPPMIANQVKRQADNFVLLYYRGLLMCDDETCKHTTRSISFRLVGDSERGTVCPNYPRCNGRLHRKYTEADLYKQLSYFCHVLDTVCGIDKVETKSRMSIEKELIKLRPMIDPAASTVEKIRDRCAYGWVKLQDLVVTV* 1560
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev05g0653 1559 Gene3D - 377 576 - -
Aev05g0653 1559 MobiDBLite consensus disorder prediction 157 201 - -
Aev05g0653 1559 Gene3D - 1156 1342 IPR042087 -
Aev05g0653 1559 PRINTS DNA-directed DNA-polymerase family B signature 1078 1086 IPR006172 GO:0000166|GO:0003676|GO:0003887
Aev05g0653 1559 PRINTS DNA-directed DNA-polymerase family B signature 949 962 IPR006172 GO:0000166|GO:0003676|GO:0003887
Aev05g0653 1559 PRINTS DNA-directed DNA-polymerase family B signature 1025 1037 IPR006172 GO:0000166|GO:0003676|GO:0003887
Aev05g0653 1559 MobiDBLite consensus disorder prediction 77 136 - -
Aev05g0653 1559 CDD POLBc_alpha 925 1328 IPR045846 GO:0003887|GO:1902975
Aev05g0653 1559 Gene3D DNA Polymerase alpha, zinc finger 1352 1545 IPR038256 -
Aev05g0653 1559 Pfam DNA polymerase alpha subunit p180 N terminal 29 95 IPR024647 -
Aev05g0653 1559 Gene3D - 417 543 - -
Aev05g0653 1559 Gene3D Helix hairpin bin 988 1039 - -
Aev05g0653 1559 Pfam DNA Polymerase alpha zinc finger 1353 1555 IPR015088 GO:0003887|GO:0006260
Aev05g0653 1559 SMART polmehr3 590 1092 IPR006172 GO:0000166|GO:0003676|GO:0003887
Aev05g0653 1559 MobiDBLite consensus disorder prediction 175 190 - -
Aev05g0653 1559 MobiDBLite consensus disorder prediction 910 932 - -
Aev05g0653 1559 Gene3D Palm domain of DNA polymerase 919 1143 IPR023211 -
Aev05g0653 1559 SUPERFAMILY DNA/RNA polymerases 874 1328 IPR043502 -
Aev05g0653 1559 PANTHER DNA POLYMERASE ALPHA CATALYTIC SUBUNIT 23 1558 - -
Aev05g0653 1559 Pfam DNA polymerase family B, exonuclease domain 406 784 IPR006133 -
Aev05g0653 1559 Pfam DNA polymerase family B 849 1312 IPR006134 GO:0000166|GO:0003677
Aev05g0653 1559 MobiDBLite consensus disorder prediction 262 290 - -
Aev05g0653 1559 MobiDBLite consensus disorder prediction 1 60 - -
Aev05g0653 1559 MobiDBLite consensus disorder prediction 28 42 - -
Aev05g0653 1559 Coils Coil 1106 1126 - -
Aev05g0653 1559 SUPERFAMILY Ribonuclease H-like 372 878 IPR012337 -
Aev05g0653 1559 MobiDBLite consensus disorder prediction 106 127 - -
Aev05g0653 1559 TIGRFAM pol2: DNA polymerase (pol2) 54 1310 - -
Aev05g0653 1559 CDD DNA_polB_alpha_exo 590 841 - -
Aev05g0653 1559 Gene3D - 590 903 IPR036397 GO:0003676
Aev05g0653 1559 ProSitePatterns DNA polymerase family B signature. 1080 1088 IPR017964 GO:0000166|GO:0003676
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev05g0653 Aev-Chr5 4527445 4538031 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev05g0653 6 1557 Core DNA Replication Machinery Family AT5G67100 59.924 0.0 1840
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev05g0653 K02320 - gmx:100798779 2202.94
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev05g0653 05 4527445 4538031 Aev05g0653 05 4527445 4538031 ECH