Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev05g0650 ATGGACTGGGTTCGTGGACGCTCCATTGGTTGTGGCAGCTTTGCCACCGTCCATTTAGCCACCGCATCGAACGGTTCCGATCTGTTTCCTTCTTCTTTTGCCGTTAAGTCCTCCGATGACTTCACCTCGTATTTGCTCAAGAACGAGGAGGATGTTCTCAGCCGCCTAGGTTCTTCTTGTCCTCAAATCATCAAGTGTTTCGGGCACGATTCTACACTCGAAAACGGCGAATCGTTTTATAATCTCTTCCTCGAATACGCTTCCGGTGGAACGCTCGCTGATCAGCTCAGGAACCAAGGTGGGAAGTTCCCTGAATCCCAAGTTCAACGATACACGAGGTCAATCATCGAAGGCCTAAAACATGTTCACGAGAATGGGTTTGTTCACTGTGACATAAAGCTGCAAAACATCTTAGTATTCGAAAACGGCCAAGTTAAATTAGCCGATTTTGGGCTGGCGAAGGAGAAAGGAGAGAAACAGGGGAAGAGGTGGGAGTGCAGGGGAACTCCTCTGTTTATGTCGCCGGAATCAGTGAACGACAGCGAGTACCAGTCTCCGGCGGATATATGGGCCTTGGGATGCGCCGTCGTGGAGATGGTCACCGGAAAACCAGCGTGGAATGTGGGAAAGGGATCCAACATGTGGTCGTTGCTGATTCGAATTGGGGTCGGAGAAGAGCTTCCAATAATTCCAGAGGAGTTGTCAGAACAGGGGAAGGATTTTCTGAGAAAGTGTTTCGTTAAGGACCCAAGGGAAAGGTGGACCGCGGAGATGCTTCTGAAGCACCCTTTTGTTTCTTGTGACGACTTCGTTCCGGTGAAGGAATTGAGTCTTAAATTGGCGTCGCCGTCGCCGAGAACAAACTTCGATTTCCCTGATTGGGGTTCTTCCATCGAAACGGCTTCAACTTCCGCCGTTTCGTCGTTTTCTCCCAGTTTGTGTTCGCCGGTGGATCGGCTACGGCGGATCGCCACCGATCAGGGGTTGCCGGATTGGTCAGAATCGGAGGGCTGGACTGGTGTTAGGTGA 1029 0.5102 MDWVRGRSIGCGSFATVHLATASNGSDLFPSSFAVKSSDDFTSYLLKNEEDVLSRLGSSCPQIIKCFGHDSTLENGESFYNLFLEYASGGTLADQLRNQGGKFPESQVQRYTRSIIEGLKHVHENGFVHCDIKLQNILVFENGQVKLADFGLAKEKGEKQGKRWECRGTPLFMSPESVNDSEYQSPADIWALGCAVVEMVTGKPAWNVGKGSNMWSLLIRIGVGEELPIIPEELSEQGKDFLRKCFVKDPRERWTAEMLLKHPFVSCDDFVPVKELSLKLASPSPRTNFDFPDWGSSIETASTSAVSSFSPSLCSPVDRLRRIATDQGLPDWSESEGWTGVR* 343
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev05g0650 342 SMART serkin_6 3 265 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aev05g0650 342 ProSitePatterns Serine/Threonine protein kinases active-site signature. 127 139 IPR008271 GO:0004672|GO:0006468
Aev05g0650 342 PANTHER CCR4-NOT TRANSCRIPTIONAL COMPLEX SUBUNIT CAF120-RELATED 1 311 - -
Aev05g0650 342 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE KINASE KINASE 20 1 311 - -
Aev05g0650 342 ProSitePatterns Protein kinases ATP-binding region signature. 9 36 IPR017441 GO:0005524
Aev05g0650 342 Gene3D Transferase(Phosphotransferase) domain 1 2 290 - -
Aev05g0650 342 ProSiteProfiles Protein kinase domain profile. 3 265 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aev05g0650 342 SUPERFAMILY Protein kinase-like (PK-like) 3 309 IPR011009 -
Aev05g0650 342 Pfam Protein kinase domain 5 265 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aev05g0650 342 CDD STKc_MAPKKK 2 265 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev05g0650 Aev-Chr5 4509734 4510762 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev05g0650 1 342 MAP Kinase Kinase Kinase AT5G67080 53.955 6.38e-129 370
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Aev05g0650 Pkinase 7.4e-54 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev05g0650 - - aip:107641670 469.159
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev05g0650 05 4509734 4510762 Aev01g0571 01 5257473 5258522 PCT