Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev05g0648 ATGATCATGGACGTGGACATATTGAAGAGCTGCTCTTCTTCTTCTGGTGCTGGTGGTAGTGACAGCAGCAGCAGCAGCAGCAGCAGCATGGACATGATGGCAATGATGATGCAAATGGAAAAGTTCCCTGAATTATTATTGTCATCATCATCATCTGACCCTGACCCTGCTTTTTATAACACCACCACTCTCACCTACCCATCCCAAAACAGTGATGACCAATTCTCTCTAATTGGAACCACCACCCTCCCCATATTCTCCAACATTATTAATAACCCAAATAATAATATTAGTGTAGCACCTCCTCCTCCACCACCATCAAATTTCACTAATAATCCATACCAACAACAATCCATGACTCCACCACCACAATTTCAGCTCAACAATGAAGCTTCAGGGATGAGACTCAGGGGAGCTCATCAAAACAACAAGAACTACTCATCAATGGCTGCAATGAGGGAAATGATCTTCCGAGTAGCAGTGATGCAGCCAATTCACATAGACCCGGAGTCAATAAAGGCACCCAAGAGGAGGAACGTGAAGATCTCGAAGGATCCGCAGAGCGTGGCGGCGAGGCACAGGAGGGAGAGGATAAGCGAGAGAATAAGGATTCTGCAGAGATTGGTGCCTGGTGGGACCAAAATGGACACGGCTTCTATGTTGGATGAGGCAATACATTATGTCAAGTTCCTGAAGAAGCAAGTGCAGAGTCTGGAACAGGCAGGGGCGAGTAGTAGCAGCAATAGTGTTGTTGGATTCACGGGGTTGTTTTCTTCACCATCAAGTGCCAATAATGTAGCAGTCATGAATAATATTAATTACCCTGCTTTTCTCAAAGGAGGTTGCCACCAACCTTATCATCATCCTCTTCCTATGCTTGCTTCCTCTGCTTCTAAACAACAATTGCTCAGTTGA 915 0.4536 MIMDVDILKSCSSSSGAGGSDSSSSSSSSMDMMAMMMQMEKFPELLLSSSSSDPDPAFYNTTTLTYPSQNSDDQFSLIGTTTLPIFSNIINNPNNNISVAPPPPPPSNFTNNPYQQQSMTPPPQFQLNNEASGMRLRGAHQNNKNYSSMAAMREMIFRVAVMQPIHIDPESIKAPKRRNVKISKDPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKKQVQSLEQAGASSSSNSVVGFTGLFSSPSSANNVAVMNNINYPAFLKGGCHQPYHHPLPMLASSASKQQLLS* 305
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev05g0648 304 Pfam Helix-loop-helix DNA-binding domain 192 231 IPR011598 GO:0046983
Aev05g0648 304 PANTHER BASIC HELIX-LOOP-HELIX (BHLH)-LIKE PROTEIN 24 270 - -
Aev05g0648 304 MobiDBLite consensus disorder prediction 8 29 - -
Aev05g0648 304 Gene3D - 181 249 IPR036638 GO:0046983
Aev05g0648 304 SMART finulus 188 237 IPR011598 GO:0046983
Aev05g0648 304 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 186 241 IPR036638 GO:0046983
Aev05g0648 304 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 182 231 IPR011598 GO:0046983
Aev05g0648 304 Coils Coil 221 241 - -
Aev05g0648 304 CDD bHLH_AtIND_like 183 239 - -
Aev05g0648 304 PANTHER TRANSCRIPTION FACTOR HEC3-RELATED 24 270 IPR045843 GO:0003700|GO:0006355
Aev05g0648 304 MobiDBLite consensus disorder prediction 1 29 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev05g0648 Aev-Chr5 4492726 4493640 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev05g0648 137 240 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G50330 86.538 5.02e-48 159
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Aev05g0648 HLH 2.1e-06 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev05g0648 - - gmx:100812308 187.963
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev05g0648 05 4492726 4493640 Aev05g0648 05 4492726 4493640 ECH