Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev05g0640 ATGTCGCAACGGTCGGTGCCGGCGCCGTTCTTGACGAAGACGTATGAGCTGGTGGATGATAGAGCGACGGACGAGGTGATATCGTGGGGTGAGAGTGGAAGCACTTTTGTTGTTTGGAAGCACGCGGATTTTGCCAAGGATTTGCTTCCCAATTATTTTAAGCATAACAACTTCTCTAGCTTCGTTCGCCAGCTCAACACCTATGGATTTCGAAAGATCGTGCCAGACAAATGGGAATTCGCCAACGAACATTTCAAGCGAGGCCAAAAGGAGCTTCTCGCCGAAATCAAACGCCGCAAGACCGTTTCCAATTCGCCGGCGCCGCCGACAGGAGAGGCCGCAAAATCCGGTGCCGATGGAAATTCTCAGCTGAACTCCGGCGGCGGCGGCGGAGGCGGAGGAGGAGACGACTCCACCTCCACCTCGTCCCCCGATTCGAAGAACCCTGGATCGGTGGAAACGACACCCTCTCATCAGTGCGCGAATTTATCGAGCGAGAACGAGAAATTGAAGAAGGACAACGAGACGCTGAGCTGGGAGCTGGCACGTGCGAAGAAGCAGTGCGATGAGTTGGTGGCTTTCCTGAGGGACCGCCTCAAGGTGTGTCCCGATCAGATCGACTGCATCATGCGGCAAGGAAGCTGCGGGTCCACCCGTGATCCGGTGCAATCTGATAACACTGTAGTTGATGATTATGATGATGATGACGATAAAGGCTTGGTAGGTGAGGGCGGTGGACCGGACAGTTTGAAACTGTTTGGTGTTTGGTTGAAAGGTGAGAAGGATATGGGCCGCAAGAGAGGGCACGAAGGCCCAATGGGCTTTGGTGGGCCTCCCACTAAGGATTTGAAGACTAGTACTGCTGGTGTTGTTGACTTTGGTGGTTCTAATGTTAATGTGATGATTAAGAGCAGCAAGGTCTGCAGCTGA 930 0.5333 MSQRSVPAPFLTKTYELVDDRATDEVISWGESGSTFVVWKHADFAKDLLPNYFKHNNFSSFVRQLNTYGFRKIVPDKWEFANEHFKRGQKELLAEIKRRKTVSNSPAPPTGEAAKSGADGNSQLNSGGGGGGGGGDDSTSTSSPDSKNPGSVETTPSHQCANLSSENEKLKKDNETLSWELARAKKQCDELVAFLRDRLKVCPDQIDCIMRQGSCGSTRDPVQSDNTVVDDYDDDDDKGLVGEGGGPDSLKLFGVWLKGEKDMGRKRGHEGPMGFGGPPTKDLKTSTAGVVDFGGSNVNVMIKSSKVCS* 310
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev05g0640 309 PRINTS Heat shock factor (HSF) domain signature 61 73 IPR000232 GO:0003700|GO:0006355|GO:0043565
Aev05g0640 309 PRINTS Heat shock factor (HSF) domain signature 10 33 IPR000232 GO:0003700|GO:0006355|GO:0043565
Aev05g0640 309 PRINTS Heat shock factor (HSF) domain signature 48 60 IPR000232 GO:0003700|GO:0006355|GO:0043565
Aev05g0640 309 MobiDBLite consensus disorder prediction 103 128 - -
Aev05g0640 309 Gene3D - 2 101 IPR036388 -
Aev05g0640 309 MobiDBLite consensus disorder prediction 96 169 - -
Aev05g0640 309 PANTHER HEAT STRESS TRANSCRIPTION FACTOR B-1 2 285 - -
Aev05g0640 309 SUPERFAMILY "Winged helix" DNA-binding domain 7 99 IPR036390 -
Aev05g0640 309 ProSitePatterns HSF-type DNA-binding domain signature. 49 73 IPR000232 GO:0003700|GO:0006355|GO:0043565
Aev05g0640 309 MobiDBLite consensus disorder prediction 263 282 - -
Aev05g0640 309 Pfam HSF-type DNA-binding 10 99 IPR000232 GO:0003700|GO:0006355|GO:0043565
Aev05g0640 309 SMART hsfneu3 6 99 IPR000232 GO:0003700|GO:0006355|GO:0043565
Aev05g0640 309 PANTHER HEAT SHOCK TRANSCRIPTION FACTOR 2 285 IPR027725 -
Aev05g0640 309 MobiDBLite consensus disorder prediction 135 164 - -
Aev05g0640 309 Coils Coil 160 187 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev05g0640 Aev-Chr5 4430754 4432559 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev05g0640 2 309 HSF AT4G36990 51.603 9.61e-84 252
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HSF Aev05g0640 HSF_DNA-bind 3.3e-32 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev05g0640 K09419 - gmx:100791543 394.045
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev05g0640 05 4430754 4432559 Aev05g0640 05 4430754 4432559 ECH
Aev05g0640 05 4430754 4432559 Aev01g0577 01 5317579 5337621 PCT