Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev05g0616 ATGCGTTGGTTACCAACCCTTATTTTTCCTTCTTCTTCTCCTCCATCTTCTTCTTCTTCCTCTTCTCGCACTCTCAAAACCTCTGCTTCATCTTCGTCCCTCACGGACTACCACCAAGGGAAGAAGAAACAAGACGGCGCCGCCCGAATCGCCTGGCTTTTTGGCGCTGCAAAAAAATCCACACGCTCCAGGAAGCATCACGGTGACTGCGATCACGATGACGACACGGAGGACGATGACGGCGCCGTCATTGTGCGTTGGTCTCGTTCGCCAAGCACCGCTGATCGTACCTATATTCGGTCTTACACTTCGTCCTCCTCCACCGCGAAGGTTGTGCCTCAGCCGCTGCCCTTGCCGGAGCTGACCACGGGAAAATGGTCTCGCCATAAAGATGACGATTGCCCTTTGCCATCTCTCACGCCCTCACCCACGGACGCTAACCCTTCAGGCTTTCGCATGCGAAGTGTTTTTGCGAGCCCAAGGAGGAATTCAGAGGCAGAGGAAACAAGGACAAGAGGGGTGGCTCCTCAAGCTACAGCAAGATCAAGGAGTAGTCCAGTAAGTCCTTTTGAGAGTCCCAGAGTTAGTCCACAGAAAAACAAAAATGATGATTTTGTGCCATACCATTACGTTTCATTGAAAGGGAATCAATTCTGGTCTGCACCAGAGATGGCGACAACATATTCATCAGGGTTGCCGCCTCCTGCAATCTTTGATCTTCATACATTAGGGCCTGATAACAACATTTCATCTTCTCCGTGCCAATGTTCGCCGGTTATAAGTCCCAGTCACCACTCTAGAAGCCCAACTAGACCTTCTTCTCCAATACCAAGGTTGTCCCTTGACACCTCTAGATCACATAGGGAAGGTGTTGCTCCTCTCAATGTTCACCCCTTACCTTTGCCTCCTTTGGCTGGGACAGGCTTGCTTTCCCCCACTTCTTCTAACTTTTCCCAAAGTGGGGCTATTAAGGCTGAATCTGCAGTCTCAATGAAAAGCCAATGGCAAAAAGGAAAACTTATTGGCCGAGGTACTTTCGGAAGTGTTTATGTTGCCACCAATAGAGAAACTGGGGCATTGTGTGCAATGAAAGAAGTAGACATATATGCTGATGATCCAAAATCTGCAGAGTGTATAAAGCAGTTAGAGCAGGAGATTAAAATTCTTAGCCATCTAAAACATCCAAACATTGTGCAGTATTATGGTAGTGAAATAATCGAAGACAAGTTCTATATTTATTTGGAGTATGTCCATCCCGGTTCAATAAACAAATACGTCCGCGAACATTGTGGTGCAATAACAGAAAGTGTTGTTCGGAATTTCACTCGCCATATTCTTTCTGGGTTGGCTTACTTGCATAGCAAAAAGACAATTCATAGGGATATCAAAGGGGCTAACTTGCTGGTTGATTCTGCTGGAGTAGTCAAGCTAGCTGACTTTGGGATGTCTAAGCATTTAACTGGACAAGTTACTGATCTTTCTCTGAAGGGAAGTCCATACTGGATGGCTCCAGAGCTTTTGCATGCAGTTATGCAAAAGGACAACAGCACCGAGCTAGCTTTTGCCATTGATATTTGGAGCTTGGGTTGTACAATTATCGAAATGTTCACGGGGAAGCCTCCTTGGAGCGAGTATGAAGGAGCTGCAGCTATGTTTAAGGTTATGAAGGATACTCCGGCTATACCGGAAGCACTGTCATCAGAGGGAAAAGATTTCCTGAGACTGTGCTTTAGGAGAAATCCAGCAGAGAGGCCAACTGCTTTGATGTTGTTGGATCATCGGTTTATGAAGAACTCACAGCATTCAGATGTTTTATCAAATTCCACTCACTTGTATAATTGTTGA 1845 0.4618 MRWLPTLIFPSSSPPSSSSSSSRTLKTSASSSSLTDYHQGKKKQDGAARIAWLFGAAKKSTRSRKHHGDCDHDDDTEDDDGAVIVRWSRSPSTADRTYIRSYTSSSSTAKVVPQPLPLPELTTGKWSRHKDDDCPLPSLTPSPTDANPSGFRMRSVFASPRRNSEAEETRTRGVAPQATARSRSSPVSPFESPRVSPQKNKNDDFVPYHYVSLKGNQFWSAPEMATTYSSGLPPPAIFDLHTLGPDNNISSSPCQCSPVISPSHHSRSPTRPSSPIPRLSLDTSRSHREGVAPLNVHPLPLPPLAGTGLLSPTSSNFSQSGAIKAESAVSMKSQWQKGKLIGRGTFGSVYVATNRETGALCAMKEVDIYADDPKSAECIKQLEQEIKILSHLKHPNIVQYYGSEIIEDKFYIYLEYVHPGSINKYVREHCGAITESVVRNFTRHILSGLAYLHSKKTIHRDIKGANLLVDSAGVVKLADFGMSKHLTGQVTDLSLKGSPYWMAPELLHAVMQKDNSTELAFAIDIWSLGCTIIEMFTGKPPWSEYEGAAAMFKVMKDTPAIPEALSSEGKDFLRLCFRRNPAERPTALMLLDHRFMKNSQHSDVLSNSTHLYNC* 615
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev05g0616 614 MobiDBLite consensus disorder prediction 1 42 - -
Aev05g0616 614 SMART serkin_6 335 596 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aev05g0616 614 MobiDBLite consensus disorder prediction 253 287 - -
Aev05g0616 614 MobiDBLite consensus disorder prediction 102 202 - -
Aev05g0616 614 PRINTS Tyrosine kinase catalytic domain signature 523 545 IPR001245 GO:0004672|GO:0006468
Aev05g0616 614 PRINTS Tyrosine kinase catalytic domain signature 451 469 IPR001245 GO:0004672|GO:0006468
Aev05g0616 614 PRINTS Tyrosine kinase catalytic domain signature 565 587 IPR001245 GO:0004672|GO:0006468
Aev05g0616 614 PRINTS Tyrosine kinase catalytic domain signature 414 427 IPR001245 GO:0004672|GO:0006468
Aev05g0616 614 SUPERFAMILY Protein kinase-like (PK-like) 328 604 IPR011009 -
Aev05g0616 614 ProSitePatterns Protein kinases ATP-binding region signature. 341 364 IPR017441 GO:0005524
Aev05g0616 614 Gene3D Transferase(Phosphotransferase) domain 1 331 613 - -
Aev05g0616 614 Pfam Protein kinase domain 336 596 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aev05g0616 614 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE KINASE KINASE 5 1 607 - -
Aev05g0616 614 MobiDBLite consensus disorder prediction 9 37 - -
Aev05g0616 614 MobiDBLite consensus disorder prediction 253 281 - -
Aev05g0616 614 MobiDBLite consensus disorder prediction 175 196 - -
Aev05g0616 614 MobiDBLite consensus disorder prediction 58 88 - -
Aev05g0616 614 PANTHER MAP KINASE KINASE KINASE SSK2-RELATED-RELATED 1 607 - -
Aev05g0616 614 ProSiteProfiles Protein kinase domain profile. 335 596 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev05g0616 Aev-Chr5 4244798 4247919 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev05g0616 184 613 MAP Kinase Kinase Kinase AT5G66850 64.732 0.0 568
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Aev05g0616 Pkinase 5.5e-68 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev05g0616 - - cam:101502514 696.812
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev05g0616 05 4244798 4247919 Aev01g0600 01 5543674 5548738 PCT