Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev05g0615 ATGTCGTCGTCGAATTCACCGTGCGCGGCGTGCAAGTTCCTGCGGCGGAAGTGCACGCAGGAGTGCGTGTTCGCACCGTATTTTCCGCCAGACAACCCACAGAGGTTCGCATACGTGCACAAGGTCTTCGGAGCAAGCAACGTGGCGAAGCTTCTCAACGAGCTGAACGCGGCGCAGCGAGACGACGCCGTAAAGTCCCTCGCTTACGAGGCGGAGGCGCGTTTGAGGGACCCGGTGTACGGGTGCGTGGGGCTGATTTCGGTGCTCCAGCACAGGCTCCGGCAGATCCAGGTTGAGCTTAACAACGCAAAGAAGGAGCTAGCTACATACATTGGGCCACAGGCACTTCAGGGGGTTCCAGCCGCCACCACTATTCTCCAACATCACCACCCCTTTGGCAACCAAATGTTTCCTTATAATGGTGCCATGGGGTCACCGGCTGTTGCTGCCGCGGTGGTGGGTCCCGGCGGGCAGTTGATGATTCGGGACGCTCAGCCTCAACTGCCGCCGCAGCAGCAGATCCTGGAGGCGCAGCAGCTGGCTGCGGTGGTGAGGGATCAGCAGGAGATGTTTAGGGGTTTTGAGCAGCAGCATCAGCATCATCAACAGCAACAGCAGCAGCAGCAGGAGTATCTGAGGTTCAATGGTGGAGGGTTTGATGTGGGTTCGGTTTCTTCTGGTGGTGGGGGAGTTGGTAGTGGTGATCAATTGTCTCCTTCTTTGGCTTTGGGGTCTTTCGATAATAACCCTTTCCATATGCAGCAAGGGGAAGCTCATGCTCATGGTCATCATCACATTCCACTAGAGGCGCAGCTTCTGCTCCCGCCGCAGCAGAAACAGTCGCAGCAGCGAGCACAGCAGTCACACATGACCGGACACCACCACCACCAGCCGTCGGAAAGCGAGGAGTGTAGGAGTGTTGGCCCATCTTGTTGA 936 0.5769 MSSSNSPCAACKFLRRKCTQECVFAPYFPPDNPQRFAYVHKVFGASNVAKLLNELNAAQRDDAVKSLAYEAEARLRDPVYGCVGLISVLQHRLRQIQVELNNAKKELATYIGPQALQGVPAATTILQHHHPFGNQMFPYNGAMGSPAVAAAVVGPGGQLMIRDAQPQLPPQQQILEAQQLAAVVRDQQEMFRGFEQQHQHHQQQQQQQQEYLRFNGGGFDVGSVSSGGGGVGSGDQLSPSLALGSFDNNPFHMQQGEAHAHGHHHIPLEAQLLLPPQQKQSQQRAQQSHMTGHHHHQPSESEECRSVGPSC* 312
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev05g0615 311 MobiDBLite consensus disorder prediction 276 311 - -
Aev05g0615 311 MobiDBLite consensus disorder prediction 215 263 - -
Aev05g0615 311 Pfam Lateral organ boundaries (LOB) domain 7 104 IPR004883 -
Aev05g0615 311 Coils Coil 86 106 - -
Aev05g0615 311 MobiDBLite consensus disorder prediction 229 252 - -
Aev05g0615 311 PANTHER LOB DOMAIN-CONTAINING PROTEIN 36-LIKE 1 285 - -
Aev05g0615 311 ProSiteProfiles LOB domain profile. 6 107 IPR004883 -
Aev05g0615 311 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 1 285 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev05g0615 Aev-Chr5 4229702 4230637 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev05g0615 1 252 AS2 family AT5G66870 52.113 1.36e-74 230
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Aev05g0615 LOB 1.3e-41 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev05g0615 - - lja:Lj2g3v1834030.1 344.354
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev01g0603 01 5572333 5573241 Aev05g0615 05 4229702 4230637 PCT