Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev05g0613 ATGATGGAGTTGAGTTTGGATTTGAGCTTGTCCTTCGTCCCCAACACGATTTCAGTGTTCCTTGGTGATGTTTCTGGAAGCAACAGGGACTCTTGTGAGAAATTGGCGATGCTTGAGGACTTCCTCAAGAGATTGGAGGATGAGATGAGGAAGATCGAGGCTTTCAAGCGCGAGCTTCCAATTTGCATGCTCTTAGTAAACGATGCTGTGACGAGGTTGAAGGAGGAAAAGGTTCGGTGTATGGGAATGCAAGATCCATCACCACCGGTGGCTGAAGAATTCATGCCAGTGATGAGAGCCAACAGTAACAATTCTGGAGGAAATAACAATGATAAGAAGAGTTGGATGAGTTCAGCTCAACTATGGAGCACTGAAACCAAATCGAGGTGTGAAGAAGAAGAACAAGATAGGTCTGTCTCAGAGAACCCAATTGAAACAAGGGAGAATCACAAGAACAGAAGTGGAGGAGGAGGAGCATTGTTCAATGGGAATTCGTTTCCCCAAAAGGCAGTGACGACGACCAAGGAGGTTTCACAGGTTCCTGGCTTTACTTTAATGACTCCAGCAGCTTCTGAACTGATGAACCCTAATAAGAATTCAAAATCCGGGTGCGGAGGCTCCTCTTTGCTCATGGGCCGCGTTGAGATACTAGGTCAACCTCAGCATCATCTGCAGCAGAATCCCAGGAAACAAAGGCGGTGCTGGTCGCCTGAGCTTCATCGCCGTTTCGTCGATGCGCTTCAACAACTTGGGGGAGCACAAGTGGCAACACCAAAGCAGATTAGGGAACTGATGCAAGTGGAAGGCCTCACAAATGATGAAGTGAAAAGCCACTTGCAAAAGTATAGGCTTCATGTTAGAAGATTCCCAGTTTCATCAGCTGAGAAAACTAATGATAATGGTTTATGGATGACCAAAGATCAATGTGCAAAGGAGAACTCATCGCAATCTGGTTCACCACAAGGGCCTCTTCTACTAAGAGGGTCTGTTAGAGGCAGTGTTGATGCAGAAGATGAGCAATCAGATTGCAGAAATTGGAAAGATGGAATTCACCACCAGCAACCAGAAGCTGAAAACCAGAGCCTCTAA 1089 0.4628 MMELSLDLSLSFVPNTISVFLGDVSGSNRDSCEKLAMLEDFLKRLEDEMRKIEAFKRELPICMLLVNDAVTRLKEEKVRCMGMQDPSPPVAEEFMPVMRANSNNSGGNNNDKKSWMSSAQLWSTETKSRCEEEEQDRSVSENPIETRENHKNRSGGGGALFNGNSFPQKAVTTTKEVSQVPGFTLMTPAASELMNPNKNSKSGCGGSSLLMGRVEILGQPQHHLQQNPRKQRRCWSPELHRRFVDALQQLGGAQVATPKQIRELMQVEGLTNDEVKSHLQKYRLHVRRFPVSSAEKTNDNGLWMTKDQCAKENSSQSGSPQGPLLLRGSVRGSVDAEDEQSDCRNWKDGIHHQQPEAENQSL* 363
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev05g0613 362 MobiDBLite consensus disorder prediction 309 362 - -
Aev05g0613 362 PANTHER MYB-LIKE DNA-BINDING DOMAIN, SHAQKYF CLASS PROTEIN 1 356 - -
Aev05g0613 362 MobiDBLite consensus disorder prediction 332 354 - -
Aev05g0613 362 MobiDBLite consensus disorder prediction 100 166 - -
Aev05g0613 362 SUPERFAMILY Homeodomain-like 228 288 IPR009057 -
Aev05g0613 362 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 227 287 IPR017930 -
Aev05g0613 362 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 230 285 IPR006447 GO:0003677
Aev05g0613 362 MobiDBLite consensus disorder prediction 126 152 - -
Aev05g0613 362 Pfam Myb-like DNA-binding domain 232 283 IPR001005 -
Aev05g0613 362 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 1 356 IPR044787 GO:0003700|GO:0006355
Aev05g0613 362 MobiDBLite consensus disorder prediction 309 323 - -
Aev05g0613 362 Gene3D - 229 286 - -
Aev05g0613 362 Coils Coil 35 58 - -
Aev05g0613 362 MobiDBLite consensus disorder prediction 100 125 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev05g0613 Aev-Chr5 4217869 4219568 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev05g0613 2 280 G2-like Transcription Factor Family AT4G37180 41.404 4.51e-54 177
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Aev05g0613 Myb_DNA-binding 1.5e-06 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev05g0613 - - gmx:100785723 386.341
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev05g0613 05 4217869 4219568 Aev05g0613 05 4217869 4219568 ECH