Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev05g0570 ATGTCCCAGGATTACCAACAAGGAATCTTCAGCTTCTCGAATGGGTTCGAGAGACCCCCAATAACACACCAGCAGATCCGGAGGGACTCCAACAAACTAGTCAGGTTGCAGCCACAAGGATTCGAGGCGGCACCACCGCCGCCACCATTAGTAGGAATAGAGCAAGAACCACCCCAACCAGGAGGAGGGCTTCCACCGCCAGTCTACGAAACCGCAGGTATGCTGTCAGAGATGTTCAATTTCCCTCCGGCAGGCGCCACCGCCGCCGAGCTTCTGGAACACCAGCCGGTGACGGGGTTCCGATCCCCGTCATCGTCGTCGTCGTCGAGGCAAGATTGGTACGGAAGCAGACAAAACATGATGGTAAGTGGGTTAGGAGCGTTGGGAGAGTCAAAGCAGCAGCAGATTTCAGGCATTAATGCTGACTCCATGCAGCTTTTTCTCATGAACCCCCACACCGCTGCTAGATCTCCGTCCCCCCCTCCTCCTCCATCTGCTGCTGCTGCTACTTCTTCCACTCTCCACATGCTTCTCCCCAGTCCTTCCTCTAATTCCTTGCAAGGCTTCACTAGTTCTGCCGGACCCGGAGGAGGAGCCCCTTTCGGACAATTCACATGGGTTCCTGAAAGCGAAGCAGCCGCAGCAGCAGGTGGTGGTGGTGGTAGCAGCAACCATGGTCATCATCATCATGAAATTGGAGGGGTTAATGTTGTGGAAGGCCAAGGGCTTTCCTTGTCGCTATCATCCTCCTTGCAACACTTGGAAGCGGCCAAAGCGGAGGAATTGAGGATGGGGGAGAGTGGGTTTCTTTATTACAATCAGGGCGGTGGAGGCCCTTCTTCTAATTCGGCTCAGTATTACAAGAACTTTGGTGGCGGTGGCCACCACCACCAAGCATTGCATTTGCAAGGCGGTGCCATGGGACAGGGGCATATTGGGTATGGCTCATCATCATCCTTAGGAGTAGTCAATGTTCTTAGGAATTCAAAGTATGTGAAAGCTGCACAGGAGCTTCTTGAGGAGTTTTGCAGTGTTGGGAGGGGCCACTTCAAGAAGACCAAGTTCACCAGGCAGAATTCCAACGCCGCCGGTGCCGCTGCTGCTTCTTCTTCCTCGTCTAAGGATCCTGCTCCACCGCCTCCTCTCTCAGCTGCTGATAGGATTGAGCATCAGAGAAGGAAGGTCAAACTTCTATCAATGCTTGATGAGGTGGACCGGAGATACAACCACTACTGCGAGCAGATGCAGATGGTGGTGAACTCATTCGACCTGGTGATGGGGTTCGGGGCGGCGGTGCCGTACACAGCGCTGGCGCAGAAGGCAATGTCGCGGCACTTCCGGTGCCTGAAGGATGCGATAACGGCGCAGGTGAAGCAGAGCTGCGAGGTGCTAGGAGAGAAGGAGGGGGCGGGGGGCACAGGATTGACGAAAGGAGAGACGCCGAGGCTGAAGATGCTGGAGCAGAGCCTGAGGCAGCAGAGGGCCTTCCACCAGATGGGCATGATGGAGCAGGAAGCTTGGCGACCCCAGCGAGGCCTCCCTGAACGTTCTGTCAACATCTTGAGAGCCTGGCTTTTCGAACATTTTCTCCACCCGTATCCAAGCGATGCTGATAAGCATCTGTTGGCACGACAGACTGGCCTATCGAGAAATCAGGTATCAAACTGGTTCATAAATGCCAGGGTTCGGTTGTGGAAACCCATGGTGGAAGAGATGTACCAACAAGAACTTAAAGAAGCAGAGAGCGAAGAAGCAGAAGAAGAGGGAGAAAAGAACGTCCAAAGCAGAAGCAGCAACAGCAACAACAGCAACAGCAACAGTAACAATAACAATCAGAAGCAGCAAGCAGCAGCAGCTGCATCTGCATCAGCACAGACTCCAACCACGCCATCGTCAACAGCAGCAGCGCCACCACCGCCCAAGAGATCCGATGTCAATGCTGCTGCTGAAAGCGACGCATCGCTCCTCGCAATCAATAGGCAACCCTTCTCGGAAAACCAAGCCACCACCACCACCATTATGCCCACCGCCTCTGAGGTGGCGCCACCCGTGCCCCACTGCTACGACTCATCAGGACTGCCCCTGCACAGCAGATCCATGCCCGCAGCGGACGACACGTGTCACAACGGCACATACCTTGCAGGCTCGGATTATGGGACCGCCTCTGCTGCTGCTGACATTGGATCCACTCTCATTAGGTTCGGGACCACCGCTGGTGACGTGTCACTCACACTAGGGTTACGCCACGCCGGGAACATGCCCGAGAAAACCCCTTTCTCTCTTAGAGACTTTGGAGGCATTTAA 2304 0.5486 MSQDYQQGIFSFSNGFERPPITHQQIRRDSNKLVRLQPQGFEAAPPPPPLVGIEQEPPQPGGGLPPPVYETAGMLSEMFNFPPAGATAAELLEHQPVTGFRSPSSSSSSRQDWYGSRQNMMVSGLGALGESKQQQISGINADSMQLFLMNPHTAARSPSPPPPPSAAAATSSTLHMLLPSPSSNSLQGFTSSAGPGGGAPFGQFTWVPESEAAAAAGGGGGSSNHGHHHHEIGGVNVVEGQGLSLSLSSSLQHLEAAKAEELRMGESGFLYYNQGGGGPSSNSAQYYKNFGGGGHHHQALHLQGGAMGQGHIGYGSSSSLGVVNVLRNSKYVKAAQELLEEFCSVGRGHFKKTKFTRQNSNAAGAAAASSSSSKDPAPPPPLSAADRIEHQRRKVKLLSMLDEVDRRYNHYCEQMQMVVNSFDLVMGFGAAVPYTALAQKAMSRHFRCLKDAITAQVKQSCEVLGEKEGAGGTGLTKGETPRLKMLEQSLRQQRAFHQMGMMEQEAWRPQRGLPERSVNILRAWLFEHFLHPYPSDADKHLLARQTGLSRNQVSNWFINARVRLWKPMVEEMYQQELKEAESEEAEEEGEKNVQSRSSNSNNSNSNSNNNNQKQQAAAAASASAQTPTTPSSTAAAPPPPKRSDVNAAAESDASLLAINRQPFSENQATTTTIMPTASEVAPPVPHCYDSSGLPLHSRSMPAADDTCHNGTYLAGSDYGTASAAADIGSTLIRFGTTAGDVSLTLGLRHAGNMPEKTPFSLRDFGGI* 768
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev05g0570 767 MobiDBLite consensus disorder prediction 576 647 - -
Aev05g0570 767 SMART prehox3 320 455 IPR006563 -
Aev05g0570 767 PANTHER BEL1-LIKE HOMEODOMAIN PROTEIN 2 66 756 - -
Aev05g0570 767 MobiDBLite consensus disorder prediction 1 20 - -
Aev05g0570 767 Gene3D - 510 572 - -
Aev05g0570 767 SMART HOX_1 507 571 IPR001356 GO:0003677
Aev05g0570 767 MobiDBLite consensus disorder prediction 361 387 - -
Aev05g0570 767 MobiDBLite consensus disorder prediction 594 631 - -
Aev05g0570 767 MobiDBLite consensus disorder prediction 152 171 - -
Aev05g0570 767 MobiDBLite consensus disorder prediction 41 63 - -
Aev05g0570 767 Pfam Associated with HOX 325 454 IPR006563 -
Aev05g0570 767 PANTHER HOMEOBOX PROTEIN TRANSCRIPTION FACTORS 66 756 - -
Aev05g0570 767 Coils Coil 570 590 - -
Aev05g0570 767 MobiDBLite consensus disorder prediction 39 63 - -
Aev05g0570 767 ProSiteProfiles 'Homeobox' domain profile. 504 567 IPR001356 GO:0003677
Aev05g0570 767 SUPERFAMILY Homeodomain-like 509 574 IPR009057 -
Aev05g0570 767 MobiDBLite consensus disorder prediction 212 231 - -
Aev05g0570 767 CDD homeodomain 507 568 IPR001356 GO:0003677
Aev05g0570 767 Pfam Homeobox KN domain 524 563 IPR008422 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev05g0570 Aev-Chr5 3968851 3975995 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev05g0570 1 554 Homeobox Transcription Factor Family AT4G36870 52.189 5.31e-149 445
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-BELL Aev05g0570 POX 2.7e-51 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev05g0570 - - gmx:100786231 819.69
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev05g0570 05 3968851 3975995 Aev05g0570 05 3968851 3975995 ECH