Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev05g0541 ATGGCACGAGAATGTCCTAAGCGCTCATTTTCGGACAGTGAGCTCCTCTTCCATGTCTCACTCGCTTTCTCCTCAAAGAACACTGAATTCTGTGCAAATGATGGTCACGATGATGATTCTAATGATTTTGATGATGGTTTTGTGTTTGACATTGATCCTACCTTGCTTATTGACCTTCACAAACTAGTTATTGGCGACATCATCGGAGAAGGCTCTCACTCAATTGTCTACAACGGATGGTATCAATTCAAACCTGTTGCTATAAAGGTTATGCTTCCAATAAGAACAAGGGCTGCTGCACCTGAATGTAAGGCCAGATTTCAGAGGGAGGTGAAATTACTATCTAGGATGGAACATAAAAATGTTGTGAAGTTTATTGGCGCGTCTGTGGAACCATCGATGTTGATAATCACAGAACTCTTAGGAGGTGGGTCACTTCAGAAGAACTTGAAGAGCATCTATCCAATGACTCTTGATTTGGCCAAATCTCTAAGTTATGCTTTGGACATTTCTCAAGCCATGGAGTATCTGCATGCAAATGGCATCATCCATCGCGATCTGAAGCCAGGTAATTTGCTTCTTACAGAGGACAAGATGCATCTCAAAATTGCTGATTTTGGGATAGCTAGAGAGATATGTGATGAGATGACTTGTGAGGTTGGTAGCTACCGATATATGGCTCCTGAGTTATTCAGCAAGGATCCACTTCCAAAGGGAGCAAAGAAATGCTATGATCACAAGGTGGATGTGTACAGCTTCGCAATGGTTCTGTGGTCGCTGATCAAAAACCAAGTTCCATTTAAGGAGAGGAAAGATTTGATGGCAGCATATGCTACAGCAAATAACAAGAGGCCTAGTGTGGATGAGTTTCCAGAATACATAGTTCCCTTAGTACAGTCATGTTGGGAAGAAGATCCAAAGCTGAGGCCAGAATTCAGTGACATTAGCAAAGTACTGACAAAGCTTCTCCAACATTACAGGACAATAAAGAACAAACTTTCAAGCATTGCTGAGATTGACGAACTTGATAGCCTCACAGAGGATGAGGAGGAGCAATCTCCAAACACAACACTGAACCAAACCCCTACACCTACACCTACAGAGTCTGCTGGAAACAATTCAAGCAAAAACTATTGGACTATATCACCCACTAGTGGCTGCATCAAGCGTGAGGAGGAGGAGGAGTGTGATGATGTGCCGGTGGAACCCACCAAGCCTAAAAGGAGGAATCGCAAGCCAAACTGTTTAGCCCTCTTTTTTCGCAGATGCTTTGGTATTTGA 1281 0.4301 MARECPKRSFSDSELLFHVSLAFSSKNTEFCANDGHDDDSNDFDDGFVFDIDPTLLIDLHKLVIGDIIGEGSHSIVYNGWYQFKPVAIKVMLPIRTRAAAPECKARFQREVKLLSRMEHKNVVKFIGASVEPSMLIITELLGGGSLQKNLKSIYPMTLDLAKSLSYALDISQAMEYLHANGIIHRDLKPGNLLLTEDKMHLKIADFGIAREICDEMTCEVGSYRYMAPELFSKDPLPKGAKKCYDHKVDVYSFAMVLWSLIKNQVPFKERKDLMAAYATANNKRPSVDEFPEYIVPLVQSCWEEDPKLRPEFSDISKVLTKLLQHYRTIKNKLSSIAEIDELDSLTEDEEEQSPNTTLNQTPTPTPTESAGNNSSKNYWTISPTSGCIKREEEEECDDVPVEPTKPKRRNRKPNCLALFFRRCFGI* 427
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev05g0541 426 PRINTS Tyrosine kinase catalytic domain signature 248 270 IPR001245 GO:0004672|GO:0006468
Aev05g0541 426 PRINTS Tyrosine kinase catalytic domain signature 290 312 IPR001245 GO:0004672|GO:0006468
Aev05g0541 426 PRINTS Tyrosine kinase catalytic domain signature 176 194 IPR001245 GO:0004672|GO:0006468
Aev05g0541 426 PRINTS Tyrosine kinase catalytic domain signature 138 151 IPR001245 GO:0004672|GO:0006468
Aev05g0541 426 MobiDBLite consensus disorder prediction 387 409 - -
Aev05g0541 426 Pfam Protein tyrosine and serine/threonine kinase 63 318 IPR001245 GO:0004672|GO:0006468
Aev05g0541 426 Gene3D Phosphorylase Kinase; domain 1 52 141 - -
Aev05g0541 426 Gene3D Transferase(Phosphotransferase) domain 1 143 361 - -
Aev05g0541 426 MobiDBLite consensus disorder prediction 351 384 - -
Aev05g0541 426 MobiDBLite consensus disorder prediction 344 410 - -
Aev05g0541 426 ProSitePatterns Protein kinases ATP-binding region signature. 68 89 IPR017441 GO:0005524
Aev05g0541 426 CDD STKc_MAP3K-like 68 319 - -
Aev05g0541 426 PANTHER SERINE-THREONINE PROTEIN KINASE 20 350 - -
Aev05g0541 426 PANTHER PROTEIN KINASE ATN1-LIKE PROTEIN-RELATED 20 350 - -
Aev05g0541 426 SUPERFAMILY Protein kinase-like (PK-like) 54 346 IPR011009 -
Aev05g0541 426 ProSitePatterns Serine/Threonine protein kinases active-site signature. 182 194 IPR008271 GO:0004672|GO:0006468
Aev05g0541 426 ProSiteProfiles Protein kinase domain profile. 62 323 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aev05g0541 426 SMART serkin_6 62 323 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev05g0541 Aev-Chr5 3729057 3732441 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev05g0541 44 348 MAP Kinase Kinase Kinase AT5G66710 51.603 3.24e-109 326
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-4 Aev05g0541 PK_Tyr_Ser-Thr 6.7e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev05g0541 - K04427 gmx:106796450 425.631